Job Description P04816 Confidence 32.19% Date Wed Jan 25 15:20:10 GMT 2012 Rank 162 Aligned Residues 207 % Identity 13% Template c3fkkA_ PDB info PDB header:lyase Chain: A: PDB Molecule:l-2-keto-3-deoxyarabonate dehydratase; PDBTitle: structure of l-2-keto-3-deoxyarabonate dehydratase Resolution 2.10 Å

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		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	A	C	D	P	K	Q	A	V	A	V	A	N	K	I	V	N	D	G	I	K	Y	V	I	G	H	L	C	S	S	S	T	Q	P	A	S	D	I	Y	E	D	E	G	I	L	M	I	S	P	G	A	T	N	P	E	L	T	Q	R	G	Y	Q	H	I	M	R	T	A	G	L	D	S	S	Q	G	P	T	A	A
Query Conservation
Alig confidence																																											.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.
Template Sequence		T	G	D	L	D	L	A	S	Q	K	R	A	V	D	F	M	I	D	A	G	S	D	G	L	C	I	L	A	N	F	S	E	Q	F	A	I	T	D	D	E	R	.	.	.	.	.	.	D	V	L	T	R	T	I	L	E	H	V	A	G	R	V	P	V	I	V	T	T	S	H	Y	S	T	Q	V	C	A	A	R	S
Template Known Secondary structure		T	S	S	B															T	T		S					S	S	G	G	G	T	G	G	G	S						.	.	.	.	.	.												T	T	S	S									S
Template Predicted Secondary structure																																											.	.	.	.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.							.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.						.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.
Query SS confidence																					.	.	.	.	.
Query Sequence		K	Y	I	L	E	T	V	K	P	Q	R	I	A	I	I	H	D	K	Q	.	.	.	.	.	Q	Y	G	E	G	L	A	R	S	V	Q	D	G	L	K	A	A	N	A	N	V	V	F	F	D	G	I	T	A	G	E	K	D	F	S	A	L	I	A	R	L	K	K	E	N	I	D	F	V	Y	Y	G	G	Y	Y	P
Query Conservation																					.	.	.	.	.
Alig confidence					.																.	.	.	.	.
Template Conservation					.
Template Sequence		L	R	A	.	Q	Q	L	G	A	A	M	V	M	A	M	P	P	Y	H	G	A	T	F	R	V	P	E	A	Q	I	F	E	F	Y	A	R	V	S	D	A	I	A	I	P	I	M	V	Q	D	A	P	A	S	G	T	A	L	S	A	P	F	L	A	R	M	A	R	E	I	E	Q	V	A	Y	F	K	I	E	T	P
Template Known Secondary structure					.			T	T		S							S		B	T	T	T	B																			S	S								G	G	G																S	T	T								S	T
Template Predicted Secondary structure					.
Template SS confidence
		108	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	G	Q	M	L	R	Q	A	R	S	V	G	L	K	T	Q	F	M	G	P	E	G	V	G	N	A	S	L	S	N	I	A	G	D	A	A	E	G	M	L	V	T	M	P	K	R	Y	D	Q	D	P	A	N	Q	G	I	V	D	A	L	K	A
Query Conservation
Alig confidence																																												.	.	.	.
Template Conservation																																												.	.	.	.
Template Sequence		G	A	A	N	K	L	R	E	L	I	R	L	G	G	D	A	I	E	G	P	W	D	G	E	E	A	I	T	L	L	A	D	L	H	A	G	A	T	G	A	M	T	.	.	.	.	G	G	G	F	P	D	G	I	R	P	I	L	E	A	W	R	E
Template Known Secondary structure		T													G	G	G								G	G	G	T	T							T	T							.	.	.	.		S	S														T
Template Predicted Secondary structure																																												.	.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.					.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions