Job Description P04816 Confidence 97.75% Date Wed Jan 25 15:20:10 GMT 2012 Rank 86 Aligned Residues 197 % Identity 10% Template c3egcF_ PDB info PDB header:structural genomics, unknown function Chain: F: PDB Molecule:putative ribose operon repressor; PDBTitle: crystal structure of a putative ribose operon repressor from2 burkholderia thailandensis Resolution 2.35 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	A	V	V	G	A	M	S	G	P	I	A	Q	W	G	D	M	E	F	N	G	A	R	Q	A	I	K	D	I	N	A	K	G	G	I	K	G	D	K	L	V	G	V	E	Y	D	D	A	C	D	P	K	Q	A	V	A	V	A	N	K	I	V	N	D	G	I	K	Y	V	I	G	H	L	C	S	S	S	T	Q
Query Conservation
Alig confidence									.	.																					.	.	.	.	.	.	.	.	.
Template Conservation									.	.																					.	.	.	.	.	.	.	.	.
Template Sequence		V	V	G	L	I	V	S	.	.	D	I	E	N	V	F	F	A	E	V	A	S	G	V	E	S	E	A	R	H	.	.	.	.	.	.	.	.	.	K	G	Y	S	V	L	L	A	N	T	A	E	D	I	V	R	E	R	E	A	V	G	Q	F	F	E	R	R	V	D	G	L	I	L	A	P	S	E	G	E	H	D
Template Known Secondary structure								S	.	.		T	T	S																	.	.	.	.	.	.	.	.	.	T	T									T	T															T	T		S								S	S
Template Predicted Secondary structure									.	.																					.	.	.	.	.	.	.	.	.
Template SS confidence
		69	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.										.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		P	A	S	D	I	Y	E	D	E	G	I	L	M	I	S	P	G	A	T	N	P	E	L	T	Q	R	G	Y	Q	H	I	M	R	T	A	G	L	D	S	S	Q	G	P	T	A	A	K	Y	I	L	E	T	V	K	P	Q	R	I	A	I	I	H	D	.	K	Q	Q	Y	G	E	G	L	A	R	S	V	Q	D	G	L
Query Conservation																																																																	.
Alig confidence																		.	.	.	.	.	.	.																																									.
Template Conservation																		.	.	.	.	.	.	.
Template Sequence		Y	L	R	T	E	L	P	K	T	F	P	I	V	A	V	N	.	.	.	.	.	.	.	R	E	L	R	I	P	G	C	G	A	V	L	S	E	N	V	R	G	A	R	T	A	V	E	Y	L	I	A	R	G	H	T	R	I	G	A	I	V	G	S	A	G	L	M	T	S	R	E	R	L	K	G	F	R	A	A	M
Template Known Secondary structure						S	S		T	T	S						S	.	.	.	.	.	.	.	S					T	T																						T	T			S						S	S	T	T	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.								.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	A	N	A	N	V	V	F	F	D	G	I	T	A	G	E	K	D	F	S	A	L	I	A	R	L	K	K	E	N	I	D	F	V	Y	Y	G	G	Y	Y	P	E	M	G	Q	M	L	R	Q	A	R	S	V	G	L	K	T	Q
Query Conservation
Alig confidence									.	.	.
Template Conservation									.	.	.
Template Sequence		S	A	A	G	L	P	V	.	.	.	R	Q	E	W	I	A	A	N	G	R	D	G	A	I	K	V	L	T	G	A	D	R	P	T	A	L	L	T	S	S	H	R	I	T	E	G	A	M	Q	A	L	N	V	L	G	L	R	Y	G
Template Known Secondary structure				T	T				.	.	.		G	G	G														T	S	T	T			S					S	S														T	T			B	T
Template Predicted Secondary structure									.	.	.
Template SS confidence
		211	.	.	.	.	.	.				.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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