Job Description P04816 Confidence 36.82% Date Wed Jan 25 15:20:10 GMT 2012 Rank 149 Aligned Residues 102 % Identity 11% Template c3dzdA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigma54 activator ntrc4 in the inactive2 state Resolution 2.40 Å

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		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.
Query SS confidence																																																															.	.
Query Sequence		Q	R	I	A	I	I	H	D	K	Q	Q	Y	G	E	G	L	A	R	S	V	Q	D	G	L	K	A	A	N	A	N	V	V	F	F	D	G	I	T	A	G	E	K	D	F	S	A	L	I	A	R	L	K	K	E	N	I	D	F	V	Y	Y	.	.	G	G	Y	Y	P	E	M	G	Q	M	L	R	Q	A	R	S	V
Query Conservation																																																															.	.
Alig confidence										.	.	.	.																								.	.	.	.	.	.	.																				.	.
Template Conservation										.	.	.	.																								.	.	.	.	.	.	.
Template Sequence		K	R	V	L	V	V	D	D	.	.	.	.	E	E	S	I	T	S	S	L	S	A	I	L	E	E	E	G	Y	H	P	D	T	A	K	.	.	.	.	.	.	.	T	L	R	E	A	E	K	K	I	K	E	L	F	F	P	V	I	V	L	D	V	W	X	P	D	G	D	G	V	N	F	I	D	F	I	K	E	N
Template Known Secondary structure									S	.	.	.	.															T	T							S	.	.	.	.	.	.	.	S											S			S						S			T	T			T	T	T
Template Predicted Secondary structure										.	.	.	.																								.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.					10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.								.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	K	T	Q	F	M	G	P	E	G	V	G	N	A	S	L	S	N	I	A	G	D	A	A	E	G	M	L	V	T	M	P	K	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	P	D	S	V	V	I	V	I	T	G	H	G	S	V	D	T	A	V	K	A	I	K	K	G	A	Y	E	F	L	E	K	P	F	S
Template Known Secondary structure			T	T									S	S												T							S	S
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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