Job Description P04816 Confidence 21.38% Date Wed Jan 25 15:20:10 GMT 2012 Rank 198 Aligned Residues 142 % Identity 13% Template c2dx7B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:aspartate racemase; PDBTitle: crystal structure of pyrococcus horikoshii ot3 aspartate racemase2 complex with citric acid Resolution 2.00 Å

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		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	A	C	D	P	K	Q	A	V	A	V	A	N	K	I	V	N	D	G	I	K	Y	V	I	G	H	L	C	S	S	S	T	Q	P	A	S	D	I	Y	E	D	E	G	I	L	M	I	S	P	G	A	T	N	P	E	L	T	Q	R	G	Y	Q	H	I	M	R	T	A	G	L	D	S	S	Q	G	P	T	A	A
Query Conservation
Alig confidence																																		.
Template Conservation																																		.
Template Sequence		K	G	E	D	P	R	P	Q	L	I	W	T	A	K	R	L	E	E	C	G	A	D	F	I	I	M	P	A	N	T	A	H	.	A	F	V	E	D	I	R	K	A	I	K	I	P	I	I	S	M	I	E	E	T	A	K	K	V	K	E	L	G	F	K	K	A	G	L	L	A	T	T	G	T	I	V	S	G	V	Y
Template Known Secondary structure		S																			T		S							S	G	G	G	.	G	G									S	S		B														T	T		S														T
Template Predicted Secondary structure																																		.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Y	I	L	E	T	V	K	P	Q	R	I	A	I	I	H	D	K	Q	Q	Y	G	E	G	L	A	R	S	V	Q	D	G	L	K	A	A	N	A	N	V	V	F	F	D	G	I	T	A	G	E	K	D	F	S	A	L	I	A	R	L	K	K	E	N	I	D	F	V	Y	Y	G	G	Y	Y
Query Conservation
Alig confidence												.	.	.																										.	.	.	.	.	.	.	.
Template Conservation												.	.	.																										.	.	.	.	.	.	.	.
Template Sequence		E	K	E	F	S	K	Y	G	V	E	.	.	.	I	M	T	P	T	E	D	E	Q	K	D	V	M	R	G	I	Y	E	G	V	K	A	G	N	L	.	.	.	.	.	.	.	.	K	L	G	R	E	L	L	L	K	T	A	K	I	L	E	E	R	G	A	E	C	I	I	A	G	C	T	E
Template Known Secondary structure								T	T			.	.	.																						T	T			.	.	.	.	.	.	.	.																	T	T		S	S					S
Template Predicted Secondary structure												.	.	.																										.	.	.	.	.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.				.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.									.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions