Job Description P04816 Confidence 23.43% Date Wed Jan 25 15:20:10 GMT 2012 Rank 192 Aligned Residues 120 % Identity 20% Template c1zuwA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:glutamate racemase 1; PDBTitle: crystal structure of b.subtilis glutamate racemase (race) with d-glu Resolution 1.75 Å

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		78	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		P	K	Q	A	V	A	V	A	N	K	I	.	V	N	D	G	I	K	Y	V	I	G	H	L	C	S	S	S	T	Q	P	A	S	D	I	Y	E	D	E	G	I	L	M	I	S	P	G	A	T	N	P	E	L	T	Q	R	G	Y	Q	H	I	M	R	T	A	G	L	D	S	S	Q	G	P	T	A	A	K	Y	I	L
Query Conservation													.
Alig confidence													.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	Q	Y	T	W	E	L	T	N	Y	L	L	E	N	H	H	I	K	M	L	V	I	A	C	N	T	A	T	A	I	A	L	D	D	I	Q	R	S	V	G	I	P	V	V	G	V	I	Q	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	R	A	A	I
Template Known Secondary structure																S			S																						S	S					S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.																										100	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.																.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	T	V	K	P	Q	R	I	A	I	I	H	D	K	Q	Q	Y	G	E	G	L	A	R	S	V	Q	D	G	L	K	A	A	N	A	N	V	V	F	F	D	G	I	T	A	G	E	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	S	A	L	I	A	R	L	K	K	E	N	I	D	F	V	Y
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.
Template Sequence		K	V	T	D	N	Q	H	I	G	V	I	G	T	.	.	.	E	N	T	I	K	S	N	A	Y	E	E	A	L	L	A	L	N	P	D	L	K	V	E	N	L	A	C	P	L	L	V	P	F	V	E	S	G	K	F	L	D	Q	T	A	D	E	I	V	K	T	S	L	Y	P	L	K	D	T	S	I	D	S	L	I
Template Known Secondary structure					S	S	S								.	.	.						T	T											T	T									T	T						T	S																						S			S
Template Predicted Secondary structure															.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.				.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		222	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	G	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	C	T
Template Known Secondary structure				S	T
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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