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Job DescriptionP04816
Confidence35.53%DateWed Jan 25 15:20:10 GMT 2012
Rank150Aligned Residues74
% Identity15%Templatec1zrsB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:hypothetical protein; PDBTitle: wild-type ld-carboxypeptidase
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   161........170.........180.........190......... 200.........210.........220.........230..
Predicted Secondary structure 








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Query Sequence  PQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGIT. . . . . . . . AGEKDFSALIARLKKENIDFVYYGGYYPEMGQM
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Template Sequence  DGRVALIAPASAIATEVLEATLRQLEVHGVDYHLGRHVEARYRYLAGTVEQRLEDLHNAFDMPDITAVWCLRGGYGCGQL
Template Known Secondary structure 
S
SSB


TT


TTTT

BTTBSS

TTS

SS
GGGG
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   15....20.........30.........40.........50.........60.........70.........80.........90....
 
   233.
Predicted Secondary structure 
Query SS confidence 

Query Sequence  LR
Query Conservation    
Alig confidence 

Template Conservation 
 
Template Sequence  LP
Template Known Secondary structure  GG
Template Predicted Secondary structure 
Template SS confidence 

   95.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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