Job Description P77307 Confidence 39.47% Date Thu Jan 5 12:27:34 GMT 2012 Rank 12 Aligned Residues 123 % Identity 19% Template d1iwga8 SCOP info Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Resolution 3.50

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	D	D	A	S	L	T	L	L	M	V	L	F	I	C	F	N	A	A	W	N	A	Q	K	R	S	K	Y	I	A	K	A	F	I	S	S	F	I	A	I	T	V	G	A	G	I	T	L	A	V	L	I	L	S	G	S	I	E	F	I	P	M	Q	V	I	P	I	A	G	M	I	A	G	N	A	M	V	A	V
Query Conservation
Alig confidence																														.	.	.	.																																					.	.
Template Conservation																														.	.	.	.																																					.	.
Template Sequence		S	G	N	Q	A	P	S	L	Y	A	I	S	L	I	V	V	F	L	C	L	A	A	L	Y	E	S	W	S	.	.	.	.	I	P	F	S	V	M	L	V	V	P	L	G	V	I	G	A	L	L	A	A	T	F	R	G	L	T	N	D	V	Y	F	Q	V	G	L	L	.	.	T	T	I	G	L	S	A	K	N	A
Template Known Secondary structure				T	T																			T	T		S	S	S	.	.	.	.					G	G	G																T	T			B										.	.
Template Predicted Secondary structure																														.	.	.	.																																					.	.
Template SS confidence
		869	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.					.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.			.	.	.	.	.	.	.	940	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	C	Y	N	N	L	G	Q	R	V	I	S	E	Q	Q	Q	I	Q	E	K	L	S	L	G	A	T	P	K	Q	A	S	A	I	L	I	R	D	S	I	R	A	A	L	I	P	T	V	D	S	A	K	T	V	G	L	V	S	L	P	G	M	M
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	L	I	V	E	F	A	K	D	L	M	D	K	E	G	K	G	L	I	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	D	A	V	R	M	R	L	R	P	I	L	M	T	S	L	A	F	I	L	G	V	M	P	L	V	I
Template Known Secondary structure												T	T	S	S				T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T																				T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		943	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.															.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions