Job Description P77307 Confidence 8.56% Date Thu Jan 5 12:27:34 GMT 2012 Rank 26 Aligned Residues 120 % Identity 23% Template d1iwga7 SCOP info Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Resolution 3.50

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	A	S	L	T	L	L	M	V	L	F	I	C	F	N	A	A	W	N	A	Q	K	R	S	K	Y	I	A	K	A	F	I	S	S	F	I	A	I	T	V	G	A	G	I	T	L	A	V	L	I	L	S	G	S	I	E	F	I	P	M	Q	V	I	P	I	A	G	M	I	A	G	N	A	M	V	A	V	G	L
Query Conservation
Alig confidence																												.	.	.	.																															.	.
Template Conservation																												.	.	.	.																															.	.
Template Sequence		H	E	V	V	K	T	L	V	E	A	I	I	L	V	F	L	V	M	Y	L	F	L	Q	N	F	R	.	.	.	.	A	T	L	I	P	T	I	A	V	P	V	V	L	L	G	T	F	A	V	L	A	A	F	G	F	S	I	N	T	L	.	.	T	M	F	G	M	V	L	A	I	G	L	L	V	D	D	A	I	V
Template Known Secondary structure																					T	T				T	T	.	.	.	.	T	T	T																			T	T	T			S				.	.
Template Predicted Secondary structure																												.	.	.	.																															.	.
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.					.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.			.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		C	Y	N	N	L	G	Q	R	V	I	S	E	Q	Q	Q	I	Q	E	K	L	S	L	G	A	T	P	K	Q	A	S	A	I	L	I	R	D	S	I	R	A	A	L	I	P	T	V	D	S	A	K	T	V	G	L	V	S	L	P	G	M
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.								.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.								.	.	.	.
Template Sequence		V	V	E	N	V	E	R	V	M	A	E	E	.	.	.	.	.	.	.	.	.	.	G	L	P	P	K	E	A	.	.	.	.	T	R	K	S	M	G	Q	I	Q	G	A	L	V	G	I	A	M	V	L	S	A	V	F	V	P	M	A
Template Known Secondary structure													T	.	.	.	.	.	.	.	.	.	.	S			S				.	.	.	.				G	G	G	T																	T	T	T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.								.	.	.	.
Template SS confidence
		412	.	.	.	.	.	.	.	420	.	.	.											.	.	.	.	.	.	430					.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions