 |
Job Description | P77307 | Confidence | 2.96% | Date | Thu Jan 5 12:27:34 GMT 2012 |
Rank | 80 | Aligned Residues | 35 |
% Identity | 6% | Template | c3iz6A_ |
PDB info |
PDB header:ribosome | Chain: A: PDB Molecule:40s ribosomal protein sa (s2p); |
PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
|
Resolution | 5.50 Å |
|
  |   |
164 | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | T | P | K | Q | A | S | A | I | L | I | R | D | S | I | R | A | A | L | I | P | T | V | D | S | A | K | T | V | G | L | V | S | L | P | G | M | M | S | G | L | I |
Query Conservation |   |
|
|   |   |   |
|   |   |   |   |   |
|   |
|
|   |   |
|
|
|
|   |
|
|   |
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |   |   |   |
|   |
|   |
|   |   |   |
|   |   |   |
|   |   |
| . | . | . | . | . | . | . |
|   |
|
|
|
|
|
|   |   |
Template Sequence |   |
S | A | R | P | Y | G | Q | R | A | V | L | K | F | A | Q | Y | T | G | A | H | A | I | A | G | R | . |
. |
. |
. |
. |
. |
. |
H | T | P | G | T | F | T | N | Q | L |
Template Known Secondary structure |   |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |
| S |
| . | . | . | . | . | . | . |
|
| T | T | T | T | T | T | T | T |
Template Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | 110 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|