Job Description P77307 Confidence 65.78% Date Thu Jan 5 12:27:34 GMT 2012 Rank 10 Aligned Residues 153 % Identity 15% Template c3aqpB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:probable secdf protein-export membrane protein; PDBTitle: crystal structure of secdf, a translocon-associated membrane protein,2 from thermus thrmophilus Resolution 3.30 Å

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		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	L	L	M	V	L	F	I	C	F	N	A	A	W	N	A	Q	K	R	S	K	Y	I	A	K	A	F	I	S	S	F	I	A	I	T	V	G	A	G	I	T	L	A	V	L	I	L	S	G	S	I	E	F	I	P	M	Q	V	I	P	I	A	G	M	I	A	G	N	A	M	V	A	V	G	L	C	Y	N	N
Query Conservation
Alig confidence																						.	.	.																															.	.
Template Conservation																						.	.	.																															.	.
Template Sequence		A	V	M	A	V	L	V	G	L	G	L	I	L	L	Y	V	A	F	R	F	.	.	.	D	W	T	F	G	V	A	S	I	L	A	V	A	H	D	V	A	I	V	A	G	M	Y	S	L	L	G	L	E	F	.	.	S	I	P	T	I	A	A	L	L	T	I	V	G	Y	S	I	N	D	S	I	V	V	S	D	R
Template Known Secondary structure																					S	.	.	.																											T				.	.
Template Predicted Secondary structure																						.	.	.																															.	.
Template SS confidence
		570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.				590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.			620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	Q	R	V	I	S	E	Q	Q	Q	I	Q	E	K	L	S	L	G	A	T	P	K	Q	A	S	A	I	L	I	R	D	S	I	R	A	A	L	I	P	T	V	D	S	A	K	T	V	G	L	V	S	L	P	G	M	M	S	G	L	I	F	A	G	I	D	P	V	K	A	I	K	Y	Q	I	M	V	T	F	M
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.								.	.	.	.																													.	.	.	.	.									.	.
Template Conservation											.	.	.	.	.	.	.	.	.								.	.	.	.																													.	.	.	.	.									.	.
Template Sequence		I	R	E	N	Q	K	L	L	R	.	.	.	.	.	.	.	.	.	H	L	P	Y	A	E	L	.	.	.	.	V	N	R	S	I	N	Q	T	L	S	R	T	V	M	T	S	L	T	T	L	L	P	I	L	A	L	L	F	.	.	.	.	.	L	G	G	S	V	L	R	D	.	.	F	A	L	A	I	F	V	G
Template Known Secondary structure										S	.	.	.	.	.	.	.	.	.	S	S						.	.	.	.																													.	.	.	.	.									.	.
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.								.	.	.	.																													.	.	.	.	.									.	.
Template SS confidence
		645	.	.	.	.	650	.	.	.										.	.	.	.	.	.	660					.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.						.	690	.	.	.	.	.	.			.	.	.	700	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	S	T	A	S	L	S	T	I	I	A	C	Y	L	T	Y	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	F	V	G	T	Y	S	S	I	Y	V	V	S	A	L	V	V	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		705	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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