Job Description P77307 Confidence 4.14% Date Thu Jan 5 12:27:34 GMT 2012 Rank 47 Aligned Residues 174 % Identity 13% Template c1oy8A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:acriflavine resistance protein b; PDBTitle: structural basis of multiple drug binding capacity of the acrb2 multidrug efflux pump Resolution 3.63 Å

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	A	S	L	T	L	L	M	V	L	F	I	C	F	N	A	A	W	N	A	Q	K	R	S	K	Y	I	A	K	A	F	I	S	S	F	I	A	I	T	V	G	A	G	I	T	L	A	V	L	I	L	S	G	S	I	E	F	I	P	M	Q	V	I	P	I	A	G	M	I	A	G	N	A	M	V	A	V	G	L
Query Conservation
Alig confidence																																																			.	.	.	.	.														.
Template Conservation																																																			.	.	.	.	.														.
Template Sequence		H	E	V	V	K	T	L	V	E	A	I	I	L	V	F	L	V	M	Y	L	F	L	Q	N	F	R	A	T	L	I	P	T	I	A	V	P	V	V	L	L	G	T	F	A	V	L	A	A	F	.	.	.	.	.	G	F	S	I	N	T	L	T	M	F	G	M	V	.	L	A	I	G	L	L	V	D	D	A	I	V
Template Known Secondary structure																										T	T	T	T	T	T	T	T	T	T																.	.	.	.	.	T			S										.
Template Predicted Secondary structure																																																			.	.	.	.	.														.
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.						.	.	.	390	.	.	.	.	.	.	.	.	.		400	.	.	.	.	.	.	.	.	.	410	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		C	Y	N	N	L	G	Q	R	V	I	S	E	Q	Q	Q	I	Q	E	K	L	S	L	G	A	T	P	K	Q	A	S	A	I	L	I	R	D	S	I	R	A	A	L	I	P	T	V	D	S	A	K	T	V	G	L	V	S	L	P	G	M	M	S	G	L	I	F	A	G	I	D	P	V	K	A	I	K	Y	Q	I	M
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.									.	.	.	.																											.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.									.	.	.	.																											.	.	.	.	.
Template Sequence		V	V	E	N	V	E	R	V	M	A	E	E	.	.	.	.	.	.	.	.	.	.	G	L	P	P	K	E	A	T	.	.	.	.	R	K	S	M	G	Q	I	Q	G	A	L	V	G	I	A	M	V	L	S	A	V	F	V	P	M	A	.	.	.	.	.	F	F	G	G	S	T	G	A	I	Y	R	Q	F	S	I
Template Known Secondary structure													T	.	.	.	.	.	.	.	.	.	.				S					.	.	.	.			T																T	T	T	S	T	T	T	T	.	.	.	.	.				G	G	G
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.									.	.	.	.																											.	.	.	.	.
Template SS confidence
		412	.	.	.	.	.	.	.	420	.	.	.											.	.	.	.	.	.	430	.					.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.						.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	F	M	L	L	S	T	A	S	L	S	T	I	I	A	C	Y	L	T	Y	R	K	F	Y	N	S	R	H	Q	L	V	V	T	Q	L	K	K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	V	S	A	M	A	L	S	V	L	V	A	L	I	L	T	P	A	L	C	A	T	M	L	K	F	G	W	F	N	R	M	F	E	K	S	T	H
Template Known Secondary structure														T	T	T									S															T
Template Predicted Secondary structure
Template SS confidence
		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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