Job Description P37659 Confidence 99.05% Date Thu Jan 5 11:56:31 GMT 2012 Rank 1 Aligned Residues 309 % Identity 13% Template c3lxqB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein vp1736; PDBTitle: the crystal structure of a protein in the alkaline2 phosphatase superfamily from vibrio parahaemolyticus to3 1.95a Resolution 1.95 Å

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		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.				.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																																		.								.	.	.																																				.	.
Query SS confidence																																		.								.	.	.																																				.	.
Query Sequence		S	L	P	A	D	A	Q	P	F	E	L	L	V	I	N	I	C	S	L	S	W	S	D	I	E	A	A	G	L	M	S	H	.	P	L	W	S	H	F	D	.	.	.	I	E	F	K	N	F	N	S	A	T	S	Y	S	G	P	A	A	I	R	L	L	R	A	S	C	G	Q	T	S	H	T	N	L	Y	Q	.	.
Query Conservation																																		.								.	.	.																																				.	.
Alig confidence																																		.								.	.	.																																				.	.
Template Conservation
Template Sequence		P	A	T	Y	Q	G	K	R	K	N	L	V	I	L	L	Q	E	S	L	G	A	Q	F	V	G	S	L	G	G	L	P	L	T	P	N	L	D	E	L	X	Q	E	G	W	Q	F	T	Q	X	Y	A	T	G	T	R	S	V	R	G	I	E	A	V	T	T	G	F	P	P	S	P	S	R	A	V	V	K	L	S	K
Template Known Secondary structure				S			S	S										T	T			G	G	G		G	G	G	T	S		S										T	T	S				T	T				S		S	S																S	S			T	T	T		G	G
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	N	N	D	C	Y	L	F	D	N	L	S	K	L	G	F	T	Q	H	L	M	M	G	H	N	G	Q	F	G	G	F	L	K	E	V	R	E	N	G	G	M	Q	S	E	L	M	D	Q	T	N	L	P	V	I	L	L	G	F	D	G	S	P	V	Y	D	D	T	A	V	L	N	R	W	L	D	V	T	E	K
Query Conservation
Alig confidence																																									.																																				.
Template Conservation																																									.																																				.
Template Sequence		S	Q	T	G	F	F	T	I	A	D	L	L	K	E	Q	G	Y	H	T	Q	F	I	Y	G	G	E	A	N	F	D	N	X	K	T	F	F	F	G	N	.	G	F	D	Q	I	V	E	E	K	N	Y	T	N	P	G	F	V	G	S	W	G	V	S	D	E	D	L	Y	N	K	A	D	E	E	F	.	E	R	L	S
Template Known Secondary structure		G	S	S	S	B										T	T								S	S		T	T	G	G	G								T	.	T							G	G	G		S	S		S				T	T																.
Template Predicted Secondary structure																																									.																																				.
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.		.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430		.	.	.	.
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.							.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.			.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
Predicted Secondary structure																									.	.	.	.	.	.																														.	.
Query SS confidence																									.	.	.	.	.	.																														.	.
Query Sequence		D	K	N	S	R	S	A	T	F	Y	N	T	L	P	L	H	D	G	N	H	Y	P	G	.	.	.	.	.	.	V	S	K	T	A	D	Y	K	A	R	A	Q	K	F	F	D	E	L	D	A	F	F	T	E	L	E	K	S	G	.	.	R	K	V	M	V	V	V	V	P	E	H	G	G	A	L	K	G	D	R	M
Query Conservation																									.	.	.	.	.	.																														.	.
Alig confidence																									.	.	.	.	.	.																														.	.																		.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		K	G	D	K	P	F	F	S	L	V	F	T	S	S	N	H	S	P	Y	E	Y	P	E	G	K	I	E	Q	Y	D	S	E	H	X	T	R	N	N	A	V	K	Y	S	D	Y	A	L	G	T	F	F	D	K	A	K	K	S	S	Y	W	D	D	T	I	F	I	V	I	A	D	H	D	A	R	V	F	G	.	.	.
Template Known Secondary structure		T	S	S	S										S	S	S	T	T					T	T	S	S			S	S	S	S	S	S																					T	T	S	S	S	G	G	G								S			S				S	.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		435	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.
		453	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.		510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		Q	V	S	G	L	R	D	I	P	S	P	S	I	T	D	V	P	V	G	V	K	F	F	G	M	K	A	P	H	Q	G	A	P	I	V	I	E	Q	P	S	S	F	L	A	I	S	D	L	V	V	R	V	L	D	G	K	I	.	F	T	E	D	N	V	D	W	K	K	L	T	S	G	L	P	Q	T	A	P	V	S
Query Conservation																																																											.
Alig confidence		.	.	.	.	.																						.	.	.	.	.	.																										.
Template Conservation		.	.	.	.	.																						.	.	.	.	.	.
Template Sequence		.	.	.	.	.	A	N	L	V	P	V	K	H	F	H	I	P	A	L	I	I	G	K	D	I	Q	.	.	.	.	.	.	P	R	K	D	D	R	I	A	N	N	I	D	X	P	P	T	L	L	S	L	I	G	V	D	A	K	T	P	X	I	G	R	D	L	T	K	P	L	A	R	E	D	E	R	A	X	X	Q
Template Known Secondary structure		.	.	.	.	.		S	S			G	G	G	T								S	T	T			.	.	.	.	.	.										G	G	G										T									S			T	T	S				G	G	G
Template Predicted Secondary structure		.	.	.	.	.																						.	.	.	.	.	.
Template SS confidence
							512	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.							.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580
		532	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	S	N	A	V	V	I	Q	Y	Q	D	K	P	Y	V	R	L	N	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	D	K	N	F	G	Y	L	T	R	D	N	L	V	V	L	S	P	G	E
Template Known Secondary structure			T	T							S	S							T	T	T
Template Predicted Secondary structure
Template SS confidence
		581	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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