|   |
237 | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | |
|
. | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | |
. | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
| . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| . |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | L | V | I | N | I | C | S | L | S | W | S | D | I | E | A | A | G | . |
. |
L | M | S | H | P | L | W | S | H | F | D | I | E | F | K | N | F | N | S | A | T | . |
S | Y | S | G | P | A | A | I | R | L | L | R | A | S | C | G | Q | T | S | H | T | N | L | Y | Q | P | A | N | N | D | C | Y | L | F | D | N | L | S |
Query Conservation |   |
|
|
|
|   |
|
|
|
|
|
|
|
|
|   |   |
|
| . | . |   |   |   |
|
|
|   |   |
|
|
|
|
|
|   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |   |
|
|   |   |
|   |   |   |
|   |
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|   |
|
|
|   |   |   |   |   |   |
|
|
|
|   |   |
|
|   |   |
|
|   |   |   |   |   |   |
|
|
|
|
|   |
|   |
|
|
|   |
|
|   |
|
|
| . | . |
|
|   |   |
|
|
|
|   |
| . | . | . | . | . |   |   |   |
|   |   |   |
Template Sequence |   |
L | I | I | F | S | V | D | G | F | R | A | S | Y | M | K | K | G | S | K | V | M | P | N | I | E | K | L | R | S | C | G | T | H | A | P | Y | M | R | P | V | Y | P | T | K | T | F | P | N | L | Y | T | L | A | T | G | L | . |
. |
Y | P | E | S | H | G | I | V | G | N | . |
. |
. |
. |
. |
S | M | Y | D | P | V | F |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T |
|
| G | G | G | G | G | S |
| T | T | T | S |  |  |  |  |  |  |  |  |  | S |  |  |
| S |
|  |  |
|
| S | S |
| S |  |  |  |  |  |  |  |  |  |  |
| S | . | . |
|  |  |  |  | S |
|
|
| S | . | . | . | . | . | S |  |  |  | T | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
| . | . |
|
|  |  |
|
|
|
|
|
| . | . | . | . | . |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
165 | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | |
|
. | . | . | . | . | . | . | . | . | 230 | |
|
|
|
|
. | . | . | . | . | . | . |
  |
  |   |
314 | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | |
|
|
330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | |
. | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |
|
|
|
|
|
|  | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
| . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | L | G | F | T | Q | H | L | M | M | G | H | N | G | Q | F | . |
. |
. |
G | G | F | L | K | E | V | R | E | N | G | G | M | Q | S | E | L | M | D | Q | T | N | L | P | V | I | L | L | G | F | D | G | S | . |
P | V | Y | D | D | T | A | V | L | N | R | W | L | D | V | T | E | K | D | K | N | S | R | S | A | T | F |
Query Conservation |   |
  |
|
|
|   |   |   |
|   |
|
|
|
|
|   |
| . | . | . |
|   |
|
|   |   |
|   |   |   |
|
|
|   |   |
|
|   |   |   |   |   |   |   |
|
|   |   |
|
|
|
|
| . |
|
|
|
|
|   |   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |   |   |   |
|   |
|
|
|   |   |   | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|   |
|   |   |   |
|
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |
|
|   |
|
|
Template Sequence |   |
D | A | S | F | H | L | R | G | R | E | K | F | N | H | R | W | W | G | G | Q | P | L | W | I | T | A | T | K | Q | G | V | R | A | G | T | F | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
W | S | V | S | I | P | H | E | R | R | I | L | T | I | L | Q | W | L | S | L | P | D | N | E | R | P | S | V | Y | A | F | Y |
Template Known Secondary structure |   |
T |  |  |  |
| S | S | S | S | G | G | G |
| T | T | S |
|
| S |
|
|  |  |  |  |  |  | T | T | T |
|
| B |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  | T | T | S |
| T | T | T |
|
| S |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
238 | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . |
  |
  |   |
390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | |
|
. | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | N | T | L | P | L | H | D | G | N | H | Y | P | G | V | S | K | T | A | D | Y | K | A | R | A | Q | K | F | F | D | E | L | D | A | F | F | T | E | L | E | K | S | G | . |
. |
R | K | V | M | V | V | V | V | P | E | H | G | G | A | L | K | G | D | R | M | Q | V | S | G | L | R | D | I | P | S | P | S | I | T | D |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |
|
|
|   |
|   |
|   |
|   |   |   |
|
|   |
|
| . | . |
|   |   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |
Alig confidence |   |
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
| . | . |
|   |   |
|
|   |   |
|
|   |
|   |
| . |   |   |   |
|
|   |   |
|
|   |   |
|
|   |
|
|   |   |
|
|   |   |
|
|   |
|   |
|   |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|   |   |   |   |   |
|   |
Template Sequence |   |
S | E | Q | P | . |
. |
D | F | S | G | H | K | Y | G | P | F | G | P | E | . |
M | T | N | P | L | R | E | I | D | K | T | V | G | Q | L | M | D | G | L | K | Q | L | R | L | H | R | C | V | N | V | I | F | V | G | D | H | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
M | E | D | V | T | C | D | R | T | E | F |
Template Known Secondary structure |   |
 |  |  |  | . | . |  |  |  |  |  |  |  |
| T | T |
| G | G | . | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| T | T | T |
|  |  |  |  |  |  | S |
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |
|
| S | S | S |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
| . | . |
|  |  |  |  |  |
|
|
|
|
|  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
307 | . | . | 310 | |
|
. | . | . | . | . | . | . | . | . | 320 | . | . | . | |
. | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 370 | . |
  |
  |   |
468 | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | |
|
. | . | . | . | . | 540 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|  |  |  |  |  |  |
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | P | V | G | V | K | F | F | G | M | K | A | P | H | Q | G | A | P | I | V | I | E | Q | P | S | S | F | L | A | I | S | D | L | V | V | R | V | L | D | G | K | I | F | T | E | D | N | V | D | W | K | K | L | T | S | G | L | P | Q | T | A | P | V | S | E | N | S | . |
. |
N | A | V | V | I | Q | Y | Q | D | K | P |
Query Conservation |   |
|
|
|
|
|
|   |
|
|   |   |   |   |   |   |
|   |
|   |   |
|   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |
|
|
|
|   | . | . |   |   |   |
|
|   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   | . | . | . |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|   | . | . | . |   |
|
|   |
|   |
|
|   |   |   |   |
|
|   |
|
|
|
|   |   |   |   |
|
|
Template Sequence |   |
L | S | N | Y | L | T | N | V | D | D | I | T | L | V | P | G | T | L | G | R | I | R | A | K | Y | D | P | . |
. |
. |
K | T | I | I | A | A | L | T | C | K | K | P | D | Q | H | F | K | P | Y | M | K | Q | . |
. |
. |
H | L | P | K | R | L | H | Y | A | N | N | R | R | I | E | D | I | H | L | L | V | D | R | R | W |
Template Known Secondary structure |   |
G | G | G | T |
| S |
|
| T | T |  |  |  |  |
| B | S |  |  |  |  |  |  |
|
|
|  | . | . | . |  |  |  |  |  | T | T | S | S |
| S | T | T |
|
|  |  |  |  |  | G | G | . | . | . | G | S |
| G | G | G |
|
|
| S | S | T | T | S |
| S |  |  |  |  |  |
| T | T |
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
372 | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | |
|
|
. | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | |
|
|
. | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . |
  |
  |   |
546 | . |
Predicted Secondary structure |   |
 |  |
Query SS confidence |   |
|
|
Query Sequence |   |
Y | V |
Query Conservation |   |
|
|
Alig confidence |   |
|
|
Template Conservation |   |
  |   |
Template Sequence |   |
H | V |
Template Known Secondary structure |   |
 |  |
Template Predicted Secondary structure |   |
 |  |
Template SS confidence |   |
|
|
  |   |
452 | . |
  |