Job Description P37659 Confidence 98.86% Date Thu Jan 5 11:56:31 GMT 2012 Rank 2 Aligned Residues 259 % Identity 15% Template c2w8dB_ PDB info PDB header:transferase Chain: B: PDB Molecule:processed glycerol phosphate lipoteichoic acid synthase 2; PDBTitle: distinct and essential morphogenic functions for wall- and2 lipo-teichoic acids in bacillus subtilis Resolution 2.35 Å

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		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.			.	.	.	.	.	260	.	.	.	.						.	.	.	.	.	270	.	.	.	.	.		.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.
Predicted Secondary structure																				.	.											.	.	.	.	.												.																																.
Query SS confidence																				.	.											.	.	.	.	.												.																																.
Query Sequence		L	L	V	I	N	I	C	S	L	S	W	S	D	I	E	A	A	G	.	.	L	M	S	H	P	L	W	S	H	F	.	.	.	.	.	D	I	E	F	K	N	F	N	S	A	T	.	S	Y	S	G	P	A	A	I	R	L	L	R	A	S	C	G	Q	T	S	H	T	N	L	Y	Q	P	A	N	N	D	C	.	Y
Query Conservation																				.	.											.	.	.	.	.												.																																.
Alig confidence																				.	.											.	.	.	.	.												.																																.
Template Conservation
Template Sequence		V	I	Y	V	S	L	E	S	L	Q	S	F	I	I	D	Y	K	I	D	G	K	E	V	T	P	F	L	N	K	L	A	H	D	N	E	T	F	Y	F	D	N	F	F	H	Q	T	G	Q	G	K	S	D	A	E	F	X	X	E	N	S	L	Y	P	L	A	Q	G	S	V	F	V	N	K	A	Q	N	T	L	Q	S
Template Known Secondary structure								T	T			G	G	G	T	T				T	T			S	S									S	S	S	S				S	S							T	T																S	S	S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	D	N	L	S	K	L	G	F	T	Q	H	L	M	M	G	H	N	G	Q	F	G	G	F	L	K	E	V	R	E	N	G	G	M	Q	S	E	L	M	D	Q	T	N	L	P	V	I	L	L	G	F	D	G	S	P	V	Y	D	D	T	A	V	L	N	R	W	L	D	V	T	E	K	D	K	N	S	R	S	A
Query Conservation
Alig confidence																																																.	.	.																					.
Template Conservation																																																.	.	.																					.
Template Sequence		V	P	A	I	L	K	S	K	N	Y	T	S	A	T	F	H	G	N	T	Q	T	F	W	N	R	N	E	X	Y	K	A	E	G	I	D	K	F	F	D	S	A	Y	Y	D	X	N	.	.	.	E	E	N	T	K	N	Y	G	X	K	D	K	P	F	F	K	E	S	X	P	.	L	L	E	S	L	P	Q	P	F	Y
Template Known Secondary structure						G	G	G	G	T								S	S		T	T	G	G	G									T							G	G	G	S				.	.	.	T	T	T	B		S	S	S	B												.				T	S		S	S
Template Predicted Secondary structure																																																.	.	.																					.
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.				.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.		.	.	.	.	.	.	400	.	.	.
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.												.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.			.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.																													.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.																													.	.
Query Sequence		T	F	Y	N	T	L	P	L	H	D	G	N	H	Y	P	G	V	.	.	.	.	.	.	.	.	.	.	.	S	K	T	A	D	Y	K	A	R	A	Q	K	F	F	D	E	L	D	A	F	F	T	E	L	E	K	S	G	.	.	R	K	V	M	V	V	V	V	P	E	H	G	G	A	L	K	G	D	R	M	Q	V
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.																													.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.																													.	.
Template Conservation
Template Sequence		T	K	F	I	T	L	S	N	H	F	P	F	G	X	D	E	G	D	T	D	F	P	A	G	D	F	G	D	S	V	V	D	N	Y	F	Q	S	A	H	Y	L	D	Q	S	I	E	Q	F	F	N	D	L	K	K	D	G	L	Y	D	K	S	I	I	V	X	Y	G	D	H	Y	G	I	S	E	N	H	N	K	A	X
Template Known Secondary structure								S	S		T	T					B	T	T	B							S	S																												T	S		G	G	G									S		S	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
		455	.	.	.	.	460	.	.	.	.	.	.							.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.
Query Sequence		S	G	L	R	D	I	P	S	P	S	I	T	.	.	.	.	.	.	D	V	P	V	G	V	K	F	F	G	M	K	A	P	H	Q	G	A	P	I	V	I	E	Q	P	S	S	F	L	A	I	S	D	L	V	V	R	V	L
Query Conservation														.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.												.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.
Template Sequence		A	K	V	L	G	K	D	E	I	T	D	Y	D	N	A	Q	L	Q	R	V	P	L	F	I	H	A	A	G	V	.	.	.	.	.	.	K	G	E	K	V	H	K	Y	A	G	D	V	D	V	A	P	T	I	L	H	L	L
Template Known Secondary structure					T	T	S	S										T	T	B								T	T	S	.	.	.	.	.	.							S				G	G	G									T
Template Predicted Secondary structure																															.	.	.	.	.	.
Template SS confidence
		484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.							.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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