Job Description P37659 Confidence 98.57% Date Thu Jan 5 11:56:31 GMT 2012 Rank 3 Aligned Residues 290 % Identity 14% Template c2w5tA_ PDB info PDB header:transferase Chain: A: PDB Molecule:processed glycerol phosphate lipoteichoic acid PDBTitle: structure-based mechanism of lipoteichoic acid synthesis by2 staphylococcus aureus ltas. Resolution 1.60 Å

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		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.			.	.	.	.	.	.	260	.	.	.	.	.							.	.	.	.	270	.	.	.
Predicted Secondary structure																																																						.	.													.	.	.	.	.	.
Query SS confidence																																																						.	.													.	.	.	.	.	.
Query Sequence		T	T	A	N	L	N	A	W	L	N	N	F	Y	N	A	E	A	K	R	K	S	T	F	P	S	S	L	P	A	D	A	Q	P	F	E	L	L	V	I	N	I	C	S	L	S	W	S	D	I	E	A	A	.	.	G	L	M	S	H	P	L	W	S	H	F	D	.	.	.	.	.	.	I	E	F	K	N	F	N	S
Query Conservation																																																						.	.													.	.	.	.	.	.
Alig confidence																																.	.	.	.																			.	.													.	.	.	.	.	.
Template Conservation																																.	.	.	.
Template Sequence		S	E	D	D	L	T	K	V	L	N	Y	T	K	Q	R	Q	T	E	P	N	P	E	Y	Y	G	V	A	K	K	K	.	.	.	.	N	I	I	K	I	H	L	E	S	F	Q	T	F	L	I	N	K	K	V	N	G	K	E	V	T	P	F	L	N	K	L	S	S	G	K	E	Q	F	T	Y	F	P	N	F	F	H
Template Known Secondary structure													T	S	T	T						T	T	T	T	T	T	T	T	T		.	.	.	.								T	T			G	G	G	T	T				T	T			S	S								T	T		S	S					T	T
Template Predicted Secondary structure																																.	.	.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.					.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		274	.	.	.	.	.	280	.		.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300			.	.	.	.	.	.	.	.	.	310	.	.		.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.																				.	.													.
Query SS confidence										.																				.	.													.
Query Sequence		A	T	S	Y	S	G	P	A	.	A	I	R	L	L	R	A	S	C	G	Q	T	S	H	T	N	L	Y	Q	.	.	P	A	N	N	D	C	Y	L	F	D	N	L	.	S	K	L	G	F	T	Q	H	L	M	M	G	H	N	G	Q	F	G	G	F	L	K	E	V	R	E	N	G	G	M	Q	S	E	L	M	D	Q
Query Conservation										.																				.	.													.
Alig confidence										.																				.	.													.
Template Conservation
Template Sequence		Q	T	G	Q	G	K	T	S	D	S	E	F	T	M	D	N	S	L	Y	G	L	P	Q	G	S	A	F	S	L	K	G	D	N	T	Y	Q	S	L	P	A	I	L	D	Q	K	Q	G	Y	K	S	D	V	M	H	G	D	Y	K	T	F	W	N	R	D	Q	V	Y	K	H	F	G	I	D	K	F	Y	D	A	T	Y
Template Known Secondary structure					T	T	T											S					S	S	S						S	T	T	S																						S	S		T	T	G	G	G									T							G	G	G
Template Predicted Secondary structure
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.												.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	N	L	P	V	I	L	L	G	F	D	G	S	P	V	Y	D	D	T	A	V	L	N	R	W	L	D	V	T	E	K	D	K	N	S	R	S	A	T	F	Y	N	T	L	P	L	H	D	G	N	H	Y	P	G	V	S	K	T	.	.	.	.	.	.	.	.	.	.	.	A	D	Y	K	A	R	A	Q	K	F	F
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.													.																															.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.													.
Template Sequence		Y	D	M	S	D	K	N	V	V	N	L	G	.	.	.	L	K	D	K	I	F	F	K	D	S	A	N	.	Y	Q	A	K	M	K	S	P	F	Y	S	H	L	I	T	L	T	N	H	Y	P	F	T	L	D	E	K	D	A	T	I	E	K	S	N	T	G	D	A	T	V	D	G	Y	I	Q	T	A	R	Y	L	D
Template Known Secondary structure		S				G	G	G			T	T		.	.	.													.				T	S		S	S									S	S		T	T					G	G	G			S					S	S
Template Predicted Secondary structure														.	.	.													.
Template SS confidence
		374	.	.	.	.	.	380	.	.	.	.	.				.	.	.	.	390	.	.	.	.	.	.	.		.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.			.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.						.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.
Predicted Secondary structure																	.	.																																.	.	.	.	.
Query SS confidence																	.	.																																.	.	.	.	.
Query Sequence		D	E	L	D	A	F	F	T	E	L	E	K	S	G	R	.	.	K	V	M	V	V	V	V	P	E	H	G	G	A	L	K	G	D	R	M	Q	V	S	G	L	R	D	I	P	S	P	S	.	.	.	.	.	I	T	D	V	P	V	G	V	K	F	F	G	M	K	A	P	H	Q	G	A	P	I	V	I	E	Q	P
Query Conservation																	.	.																																.	.	.	.	.
Alig confidence																	.	.																																.	.	.	.	.															.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.
Template Sequence		E	A	L	E	E	Y	I	N	D	L	K	K	K	G	L	Y	D	N	S	V	I	M	I	Y	G	D	H	Y	G	I	S	E	N	H	N	N	A	M	E	K	L	L	G	E	K	I	T	P	A	K	F	T	D	L	N	R	T	G	F	W	I	K	I	P	G	K	S	.	.	.	.	.	.	G	G	I	N	N	E	Y
Template Known Secondary structure															T		S	T	T	S								S		S	S		G	G	G									T	S										T	T	B								T	T			.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.
Template SS confidence
		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.							.	.	.	520	.	.	.
		492	.	.	.	.	.	.	.	500	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	F	L	A	I	S	D	L	V	V	R	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	Q	V	D	V	M	P	T	I	L	H	L	A
Template Known Secondary structure				G	G	G
Template Predicted Secondary structure
Template SS confidence
		524	.	.	.	.	.	530	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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