Job Description P28303 Confidence 5.43% Date Thu Jan 5 11:44:36 GMT 2012 Rank 68 Aligned Residues 306 % Identity 8% Template c2hydB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:abc transporter homolog; PDBTitle: multidrug abc transporter sav1866 Resolution 3.00 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																																																	.	.
Query SS confidence																																																	.	.
Query Sequence		S	S	D	K	A	L	W	H	L	A	L	P	M	I	F	S	N	I	T	V	P	L	L	G	L	V	D	T	A	V	I	G	H	L	D	S	P	V	Y	L	G	G	V	A	V	G	A	.	.	T	A	T	S	F	L	F	M	L	L	L	F	L	R	M	S	T	T	G	L	T	A	Q	A	Y	G	A	K	N	P	Q
Query Conservation																																																	.	.
Alig confidence																																																	.	.
Template Conservation
Template Sequence		P	Y	K	Y	R	I	F	A	T	I	I	V	G	I	I	K	F	G	I	P	M	L	I	P	L	L	I	K	Y	A	I	D	G	V	I	N	N	H	A	L	T	T	D	E	K	V	H	H	L	T	I	A	I	G	I	A	L	F	I	F	V	I	V	R	P	P	I	E	F	I	R	Q	Y	L	A	Q	W	T	S	N
Template Known Secondary structure		G	G													T	T	T																	T	T	T	T		S	S		T	T	T					T	T	T												T
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	A	R	T	L	V	Q	P	L	L	L	A	L	G	A	G	A	L	I	A	L	L	R	T	P	I	I	D	L	A	L	H	I	V	G	G	S	E	A	V	L	E	Q	A	R	R	F	L	E	I	R	W	L	S	A	P	A	S	L	A	N	L	V	L	L	G	W	L	L	G	V	Q	Y	A	R	A	P	V	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	I	L	Y	D	I	R	K	K	L	Y	N	H	L	Q	A	L	S	A	R	F	Y	A	N	N	Q	V	G	Q	V	I	S	R	V	I	N	D	V	E	Q	T	K	D	F	I	L	T	G	L	M	N	I	W	L	D	C	I	T	I	I	I	A	L	S	I	M	F	F	L	D	V	K	L	T	L	A	A	L	F	I
Template Known Secondary structure																		S							T	S																T																																						T
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	V	V	G	N	I	L	N	I	V	L	D	V	W	L	V	M	G	L	H	M	N	V	Q	G	A	A	L	A	T	V	I	A	E	Y	A	T	L	L	I	G	L	L	M	V	R	K	I	L	K	L	R	G	I	S	G	E	M	L	K	T	A	W	R	G	N	F	R	R	L	L	A	L	N	R	D	I	M	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	P	F	Y	I	L	T	V	Y	V	F	F	G	R	L	R	K	L	T	R	E	R	S	Q	A	L	A	E	V	Q	G	F	L	H	E	R	V	Q	G	I	S	V	V	K	S	F	A	I	E	D	N	E	A	K	N	F	D	K	K	N	T	N	F	L	T	R	A	L	K	H	T	R	W	N	A	Y	S	F	A	A
Template Known Secondary structure																																															T	T
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	L	L	L	Q	L	C	F	G	A	I	T	V	L	G	A	R	L	G	S	D	I	I	A	V	N	A	V	L	M	T	L	L	T	F	T	A	Y	A	L	D	G	F	A	Y	A	V	E	A	H	S	G	Q	A	Y	G	A	R	D	G	S	Q	L	L	D	V	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	N	T	V	T	D	I	G	P	I	I	V	I	G	V	G	A	Y	L	A	I	S	G	S	I	T	V	G	T	L	A	A	F	V	G	Y	L	E	L	L	F	G	P	L	R	R	L	V	A	S	F	T	T	L	T	Q	S	F	A	S	M	D	R	V	F	Q	L	I
Template Known Secondary structure																						T	T	T	S	S		T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions