Job Description P18777 Confidence 4.07% Date Thu Jan 5 11:37:08 GMT 2012 Rank 12 Aligned Residues 237 % Identity 10% Template d1ffta_ SCOP info Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like Resolution 3.50

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	H	E	W	P	L	M	I	F	T	V	F	G	Q	C	V	A	G	G	F	I	V	L	A	L	A	L	L	K	G	D	L	R	A	E	A	Q	Q	R	V	I	A	C	M	F	G	L	W	V	L	M	G	I	G	F	I	A	S	M	L	H	L	G	S	P	M	R	A	F	N	S	L	N	R	V	G	A	S	A	L
Query Conservation
Alig confidence															.	.	.	.																																																							.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.																																																							.	.	.	.	.	.	.	.
Template Sequence		A	W	G	H	P	E	V	Y	I	L	I	L	P	.	.	.	.	V	F	G	V	F	S	E	I	A	A	T	F	S	R	K	R	L	F	G	Y	T	S	L	V	W	A	T	V	C	I	T	V	L	S	F	I	V	W	L	H	H	F	F	T	M	G	A	G	A	N	V	N	A	F	.	.	.	.	.	.	.	.	F
Template Known Secondary structure											T	T			.	.	.	.														T	S			S	S														T	T	S	S		G	G	G	G	T	T	T	T	T									.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.	.	.	.																																																							.	.	.	.	.	.	.	.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.					.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.									.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	N	E	I	A	S	G	S	I	F	F	A	V	G	G	I	G	W	L	L	A	M	L	K	K	L	S	P	A	L	R	T	L	W	L	I	V	T	M	V	L	G	V	I	F	V	W	M	M	V	R	V	Y	N	S	I	D	T	V	P	T	W	Y	S	I	W	T	P	M	G	F	F	L	T	M	F	M	G	G	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	T	T	M	I	I	A	I	P	T	G	V	K	I	F	N	W	L	F	T	M	Y	Q	G	R	I	V	F	H	S	A	M	L	W	T	I	G	F	I	V	T	F	S	V	G	G	M	T	G	V	L	L	A	V	P	G	A	D	F	V	L	H	N	S	L	F	L	I	A	H	F	H	N	V	I	I	G	G	V
Template Known Secondary structure								T	T													T	T	T	T						S																								T	S						T	T	T	T	B													T	T	T
Template Predicted Secondary structure
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
		165	.	.	.	.	170							.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.																																																	.
Query SS confidence								.	.	.	.	.	.																																																	.
Query Sequence		L	L	G	Y	L	L	.	.	.	.	.	.	L	S	L	A	G	V	D	G	W	A	M	R	L	L	P	A	I	S	V	L	A	L	V	V	S	G	V	V	S	V	M	Q	G	A	E	L	A	T	I	H	S	S	V	Q	Q	A	A	A	.	L	V	P	D	Y	G	A	L	M	S	W	R	I	V	L	L	A	V	A
Query Conservation								.	.	.	.	.	.																																																	.
Alig confidence								.	.	.	.	.	.																																																	.
Template Conservation
Template Sequence		V	F	G	C	F	A	G	M	T	Y	W	W	P	K	A	F	G	F	K	L	N	E	T	W	G	K	R	A	F	W	F	W	I	I	G	F	F	V	A	F	M	P	L	Y	A	L	G	F	M	G	M	T	R	R	L	S	Q	Q	I	D	P	Q	F	H	T	M	L	M	I	A	A	S	G	A	V	L	I	A	L	G
Template Known Secondary structure																		S																																T	T		B	T	T		S					T	T
Template Predicted Secondary structure
Template SS confidence
		429	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	C	L	W	I	A	P	Q	L	K	G	Y	Q	P	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	C	L	V	I	Q	M	Y	V	S	I	R	D	R	D
Template Known Secondary structure														S	S
Template Predicted Secondary structure
Template SS confidence
		509	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions