Return to main results Retrieve Phyre Job Id

Job DescriptionP18777
Confidence1.34%DateThu Jan 5 11:37:08 GMT 2012
Rank49Aligned Residues65
% Identity14%Templatec3kg2A_
PDB info PDB header:membrane protein, transport proteinChain: A: PDB Molecule:glutamate receptor 2; PDBTitle: ampa subtype ionotropic glutamate receptor in complex with competitive2 antagonist zk 200775
Resolution3.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   80.........90.........100...... ...110.........120.........130.........140.
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Query Sequence  GASALSNEIASGSIFFAVGGIGWLLAM. . . . . . . . . . . . . . . . . . LKKLSPALRTLWLIVTMVLGVIFVWMMVRVYNSID
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Template Sequence  FLDPLAYEIWMCIVFAYIGVSVVLFLVSTNEFGIFNSLWFSLGAFMQPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLT
Template Known Secondary structure  TTTTS
TTGGGT

TTTTS




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   517..520.........530.........540.........550.........560.........570.........580.........590......
 
   142..
Predicted Secondary structure 
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Query Sequence  TVP
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Template Sequence  VER
Template Known Secondary structure 
Template Predicted Secondary structure 


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   626..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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