Job Description P18777 Confidence 4.14% Date Thu Jan 5 11:37:08 GMT 2012 Rank 10 Aligned Residues 141 % Identity 13% Template c3dh4A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:sodium/glucose cotransporter; PDBTitle: crystal structure of sodium/sugar symporter with bound galactose from2 vibrio parahaemolyticus Resolution 2.70 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	G	G	F	I	V	L	A	L	A	L	L	K	G	D	L	R	A	E	A	Q	Q	R	V	I	A	C	M	F	G	L	W	V	L	M	G	I	G	F	I	A	S	M	L	H	L	G	S	P	M	R	A	F	N	S	L	N	R	V	G	A	S	A	L	S	N	E	I	A	S	G	S	I	F	F	A	V	G	G
Query Conservation
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	T	A	T	I	F	T	M	D	I	Y	K	E	Y	I	S	P	D	S	G	D	H	K	L	V	N	V	G	R	T	A	A	V	V	A	L	I	I	A	C	L	.	.	.	.	.	.	.	.	.	.	.	.	I	A	P	M	L	G	G	I	G	Q	A	F	Q	Y	I	Q	E	Y	T	G	L	V	S	P	G	I	L
Template Known Secondary structure											T							S		S		S	S																				.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	G	G	G		S											T	T	T
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.													.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	W	L	L	A	M	L	K	K	L	S	P	A	L	R	T	L	W	L	I	V	T	M	V	L	G	V	I	F	V	W	M	M	V	R	V	Y	N	S	I	D	T	V	P	T	W	Y	S	I	W	T	P	M	G	F	F	L	T	M	F	M	G	G	P	L	L	G	Y	L	L	L	S	L	A	G	V	D	G	W
Query Conservation
Alig confidence												.	.	.																					.	.	.	.	.	.	.
Template Conservation												.	.	.																					.	.	.	.	.	.	.
Template Sequence		A	V	F	L	L	G	L	F	W	K	.	.	.	K	T	T	S	K	G	A	I	I	G	V	V	A	S	I	P	F	A	L	F	.	.	.	.	.	.	.	L	K	F	M	P	L	S	M	P	F	M	D	Q	M	L	Y	T	L	L	F	T	M	V	V	I	A	F	T	S	L	S	T	S	I	N	D	D	D	P	K
Template Known Secondary structure											T	.	.	.	T																				.	.	.	.	.	.	.			T	S	S	S																									T	T		S	S	S	S		T	T
Template Predicted Secondary structure												.	.	.																					.	.	.	.	.	.	.
Template SS confidence
		440	.	.	.	.	.	.	.	.	.				450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.								470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.
		180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		510	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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