Job Description P18777 Confidence 1.25% Date Thu Jan 5 11:37:08 GMT 2012 Rank 54 Aligned Residues 98 % Identity 7% Template c1ymgA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:lens fiber major intrinsic protein; PDBTitle: the channel architecture of aquaporin o at 2.2 angstrom resolution Resolution 2.24 Å

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		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	T	M	F	M	G	G	P	L	L	G	Y	L	L	L	S	L	A	G	V	D	G	W	A	M	R	L	L	P	A	I	S	V	L	A	L	V	V	S	G	V	V	S	V	M	Q	G	A	E	L	A	T	I	H	S	S	V	Q	Q	A	A	A	L	V	P	D	Y	G	A	L	M	S	W	R	I	V	L	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	V	E	I	F	L	T	L	Q	F	V	L	C	I	F	A	T	Y	D	E	R	R	N	G	R	L	G	S	V	A	L	A	V	G	F	S	L	T	L	G	H	L	F	G	M	Y	Y	T	G	A	G	M	N	P	A	R	S	F	A	P	A	I	L	T	R	N	F	T	N	H	W	V	Y	W	V	G	P	V	I
Template Known Secondary structure																						T	T	S		S																																									T			T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	L	C	L	W	I	A	P	Q	L	K	G	Y	Q	P	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	G	L	G	S	L	L	Y	D	F	L	L	F	P	R	L	K
Template Known Secondary structure												T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions