Return to main results Retrieve Phyre Job Id

Job DescriptionP30748
Confidence27.05%DateThu Jan 5 11:46:22 GMT 2012
Rank103Aligned Residues37
% Identity27%Templated2gy9d1
SCOP infoAlpha-L RNA-binding motif Alpha-L RNA-binding motif Ribosomal protein S4
Resolution15.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60 .........70....
Predicted Secondary structure 














.









Query SS confidence 



































.













Query Sequence  FPTVEALRQHMAAQSDRWALALEDGKLLAAVNQTLV. SFDHPLTDGDEVAF
Query Conservation    

  
   
    
     
      
 

    .     
  





Alig confidence 














.............







.













Template Conservation    

  




 

 .............
 


  
  

  

 

 


Template Sequence  GATRAEARQLVSHKA. . . . . . . . . . . . . IMVNGRVVNIASYQVSPNDVVSI
Template Known Secondary structure  SSSTT
.............SSSB


TT
B

TT
B
Template Predicted Secondary structure 





.............












Template SS confidence 


















































   107..110.........120. ........130.........140....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions