 |
| Job Description | P30748 | | Confidence | 42.83% | Date | Thu Jan 5 11:46:22 GMT 2012 |
| Rank | 72 | Aligned Residues | 65 |
| % Identity | 15% | Template | d1oqya4 |
| SCOP info | beta-Grasp (ubiquitin-like)
| Ubiquitin-like
| Ubiquitin-related
|
| Resolution | UNK |
|
| | |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | |
. | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 70 | . | . | . | . | . |
| Predicted Secondary structure | |
 | | | |  |  | | | | | | | |
|
|
| | | | | |
| . |
|
|
|
| | | | | | | | | | | |
|
| | | | | |
|
|
|
|
| | | | | |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
| | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
I | K | V | L | F | F | A | Q | V | R | E | L | V | G | T | D | A | T | E | V | A | A | . |
D | F | P | T | V | E | A | L | R | Q | H | M | A | A | Q | S | D | R | W | A | L | A | L | E | D | G | K | L | L | A | A | V | N | Q | T | L | V | S | F | D | H | P | . |
. |
. |
. |
. |
L | T | D | G | D | E | V | A | F | F |
| Query Conservation | |
| |
| | |
|
| |
|
|
| | |
| | | | | | | | | . | | | |
|
| | |
| | | |
| | | | |
| | | | | |
| | | | | | |
| |
|
| | | | | | | | | | . | . | . | . | . |
| | |
|
|
|
|
|
| |
| Alig confidence | |
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| |
|
| | . | . | . | . | . | . | . | | |
| | | | |
| |
| | | | |
|
| | |
|
| | |
| | | | |
| . | . | | | |
| | | | | | |
|
| | |
|
| |
| |
| | |
|
| | | | |
| | | |
| |
| | | |
| Template Sequence | |
I | T | L | K | T | . |
. |
. |
. |
. |
. |
. |
L | Q | Q | Q | T | F | K | I | R | M | E | P | D | E | T | V | K | V | L | K | E | K | I | E | A | E | K | G | . |
. |
R | D | A | F | P | V | A | G | Q | K | L | I | Y | A | G | K | I | L | S | D | D | V | P | I | R | D | Y | R | I | D | E | K | N | F | V | V | V | M |
| Template Known Secondary structure | |
| | | | | . | . | . | . | . | . | . | T | T | T | | | | | |
|
|
| T | T |
| B | | | | | | | | | | | | T |
| . | . | S | S | S |
|
| S | T | T | | | | | S | S | S | S | | |
| S | S | S | B | T | T | T | T |
|
|
| T | T | S |
| | | | |
| Template Predicted Secondary structure | |
| | | | | . | . | . | . | . | . | . |
|
|
|
| | | | | | |
|
|
|
|
| | | | | | | | | | | |
|
| . | . |
|
|
|
|
| | | | | | | | |
|
| | |
|
|
|
|
|
| | | | |
|
|
|
|
|
| | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
5 | . | . | . | . | |
|
|
|
|
|
|
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | |
|
. | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
