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Job Description | P30748 | Confidence | 56.95% | Date | Thu Jan 5 11:46:22 GMT 2012 |
Rank | 57 | Aligned Residues | 58 |
% Identity | 16% | Template | c3m62B_ |
PDB info |
PDB header:ligase/protein binding | Chain: B: PDB Molecule:uv excision repair protein rad23; |
PDBTitle: crystal structure of ufd2 in complex with the ubiquitin-like (ubl)2 domain of rad23
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Resolution | 2.40 Å |
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Query SS confidence |   |
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Query Sequence |   |
V | G | T | D | A | T | E | V | A | A | . |
D | F | P | T | V | E | A | L | R | Q | H | M | A | A | Q | S | D | R | W | A | L | A | L | E | D | G | K | L | L | A | A | V | N | Q | T | L | V | S | F | D | H | P | . |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
F | K | K | E | K | V | P | L | D | L | E | P | S | N | T | I | L | E | T | K | T | K | L | A | Q | S | I | S | . |
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C | E | E | S | Q | I | K | L | I | Y | S | G | K | V | L | Q | D | S | K | T | V | S | E | C | G | L | K | D | G | D | Q | V | V | F | M | V |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | |
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. | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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