Job Description P30748 Confidence 99.89% Date Thu Jan 5 11:46:22 GMT 2012 Rank 5 Aligned Residues 78 % Identity 27% Template c2l52A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:methanosarcina acetivorans samp1 homolog; PDBTitle: solution structure of the small archaeal modifier protein 1 (samp1)2 from methanosarcina acetivorans Resolution UNK

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.													50	.	.	.	.	.	.	.	.	.	60					.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Query Sequence		I	K	V	L	F	F	A	Q	V	R	E	L	V	G	T	D	A	T	E	V	A	A	D	F	P	T	V	E	A	L	R	Q	H	M	A	A	Q	S	D	R	W	A	L	A	L	E	D	G	.	.	.	.	.	.	.	.	.	.	.	.	K	L	L	A	A	V	N	Q	T	L	V	.	.	.	.	S	F	D	H	P
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Alig confidence																						.	.																											.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Template Conservation																						.	.
Template Sequence		V	K	V	K	L	F	A	N	L	R	E	A	A	G	T	P	E	L	P	L	.	.	S	G	E	K	V	I	D	V	L	L	S	L	T	D	K	Y	P	A	L	K	Y	V	I	F	E	K	G	D	E	K	S	E	I	L	I	L	C	G	S	I	N	I	L	I	N	G	N	N	I	R	H	L	E	G	L	E	T	L
Template Known Secondary structure								T							S	S	S					.	.			S	S													G	G	G	T	T	T	S	B		S			T	T	S	S				B		S	S						T	T	S		G	G	G	T	T	S	T	T	S
Template Predicted Secondary structure																						.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	D	G	D	E	V	A	F	F	P	P	V	T	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	D	S	D	E	I	G	I	L	P	P	V	S	G	G
Template Known Secondary structure				T	T										S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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