Return to main results Retrieve Phyre Job Id

Job DescriptionP30748
Confidence22.67%DateThu Jan 5 11:46:22 GMT 2012
Rank116Aligned Residues60
% Identity17%Templatec2dzmA_
PDB info PDB header:structural genomics unknown functionChain: A: PDB Molecule:fas-associated factor 1; PDBTitle: solution structure of the ubiquitin-like domain in human2 fas-associated factor 1 (hfaf1)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20... ......30.........40.........50.........60.... .....70.......
Predicted Secondary structure 



.



















.....







Query SS confidence 









.








































. . . . .












Query Sequence  VGTDATEVAA. DFPTVEALRQHMAAQSDRWALALEDGKLLAAVNQTLVSFDH. . . . . PLTDGDEVAFFPP
Query Conservation   
        .   

  
   
    
     
      
 

        ..... 
  





 

Alig confidence 









.
















....



















.....












Template Conservation      
  
 
    

  

  
    
....

   



   
  
 
  

    
   
 
 

  
Template Sequence  YRDRNVDVVLEDTCTVGEIKQILENELQ. . . . IPVSKMLLKGWKTGDVEDSTVLKSLHLPKNNSLYVLTP
Template Known Secondary structure 
SS
TTSB
....

TTT



SSS


TTSB


S

S
Template Predicted Secondary structure 







....





















Template SS confidence 





































































   16...20.........30.........40... ......50.........60.........70.........80.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions