Return to main results Retrieve Phyre Job Id

Job DescriptionP30748
Confidence22.19%DateThu Jan 5 11:46:22 GMT 2012
Rank118Aligned Residues23
% Identity17%Templatec1yj5C_
PDB info PDB header:transferaseChain: C: PDB Molecule:5' polynucleotide kinase-3' phosphatase fha domain; PDBTitle: molecular architecture of mammalian polynucleotide kinase, a dna2 repair enzyme
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   54.....60..... ....70......
Predicted Secondary structure 









..





Query SS confidence 











. .










Query Sequence  AVNQTLVSFDHP. . LTDGDEVAFFP
Query Conservation   

         ..
  





 
Alig confidence 











..










Template Conservation   


  
       
  

 
 
  
Template Sequence  TVGVHELKPGLSGSLSLGDVLYLVN
Template Known Secondary structure  TT

TT

TT
SSS
Template Predicted Secondary structure 








Template SS confidence 
























   73......80.........90.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions