Job Description P30748 Confidence 20.18% Date Thu Jan 5 11:46:22 GMT 2012 Rank 125 Aligned Residues 54 % Identity 11% Template c1ttnA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:dendritic cell-derived ubiquitin-like protein; PDBTitle: solution structure of the ubiquitin-like domain of human dc-2 ubp from dendritic cells Resolution UNK

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		17	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.						.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure									.																																											.	.	.	.	.
Query SS confidence									.																																											.	.	.	.	.
Query Sequence		D	A	T	E	V	A	A	.	D	F	P	T	V	E	A	L	R	Q	H	M	A	A	Q	S	D	R	W	A	L	A	L	E	D	G	K	L	L	A	A	V	N	Q	T	L	V	S	F	D	H	P	.	.	.	.	.	L	T	D	G	D	E	V	A	F	F
Query Conservation									.																																											.	.	.	.	.
Alig confidence									.																		.	.	.	.	.																					.	.	.	.	.
Template Conservation																											.	.	.	.	.
Template Sequence		K	D	L	K	L	V	V	R	S	T	D	T	V	F	H	M	K	R	R	L	H	A	A	E	G	.	.	.	.	.	V	E	P	G	S	Q	R	W	F	F	S	G	R	P	L	T	D	K	M	K	F	E	E	L	K	I	P	K	D	Y	V	V	Q	V	I
Template Known Secondary structure										T	T	S												T	T		.	.	.	.	.			S	T	T						T	T					T	T	S								S	S	S
Template Predicted Secondary structure																											.	.	.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.						.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions