Job Description P40711 Confidence 99.90% Date Thu Jan 5 12:01:14 GMT 2012 Rank 5 Aligned Residues 85 % Identity 33% Template c3d5cX_ PDB info PDB header:ribosome Chain: X: PDB Molecule:peptide chain release factor 1; PDBTitle: structural basis for translation termination on the 70s ribosome. this2 file contains the 30s subunit, release factor 1 (rf1), two trna, and3 mrna molecules of the second 70s ribosome. the entire crystal4 structure contains two 70s ribosomes as described in remark 400. Resolution 3.21 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	H	V	A	I	P	D	G	E	L	E	I	T	A	I	R	A	Q	G	A	G	G	Q	H	V	N	K	T	S	T	A	I	H	L	R	F	D	I	R	A	S	S	L	P	E	Y	Y	K	E	R	L	L	A	A	S	H	H	L	I	S	S	D	G	V	I	V	I	K	A	Q	E	Y	R	S	Q	E	L	N	R	E
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	D	F	A	L	N	M	D	E	I	R	I	D	V	M	R	A	S	G	P	G	G	Q	G	V	N	T	T	D	S	A	V	R	V	V	H	L	P	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	M	V	T	C	Q	D	S	R	S	Q	I	K	N	R	E
Template Known Secondary structure								G	G	G										S																		T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T								S	S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.																									.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	L	A	R	L	V	A	M	I	K	E	L	T	T	E	K	K	A	R	R	P	T	R	P	T	R	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A	L	M	I	L	R	S	R	L	L	E	M	K	R	A	E	E	A	E	R	L	R	K	T	R	L	A	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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