Job Description P40711 Confidence 4.28% Date Thu Jan 5 12:01:14 GMT 2012 Rank 91 Aligned Residues 61 % Identity 15% Template c2hh2A_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:kh-type splicing regulatory protein; PDBTitle: solution structure of the fourth kh domain of ksrp Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	G	G	Q	H	V	N	K	T	S	T	A	I	H	L	R	F	D	I	R	A	S	S	L	P	E	Y	Y	K	E	R	L	L	A	A	S	H	H	L	I	S	S	D	G	V	I	V	I	K	A	Q	E	Y	R	S	Q	E	L	N	R	E	A	A	L	A	R	L	V	A	M	I	K	E	L	T	T	E
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Sequence		G	R	G	G	E	N	V	K	A	I	N	Q	Q	T	G	A	F	V	E	I	S	R	Q	L	P	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	P	N	F	K	L	F	I	I	R	G	S	P	Q	.	Q	I	D	H	A	K	Q	L	I	E	E	K	I	E	G	P	L	C	P
Template Known Secondary structure		T	T	T	T										S	S	S										T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T								S				.													S		S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.																	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions