Job Description P40711 Confidence 13.27% Date Thu Jan 5 12:01:14 GMT 2012 Rank 37 Aligned Residues 52 % Identity 23% Template c1ztgD_ PDB info PDB header:dna, rna binding protein/dna Chain: D: PDB Molecule:poly(rc)-binding protein 1; PDBTitle: human alpha polyc binding protein kh1 Resolution 3.00 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	G	G	Q	H	V	N	K	T	S	T	A	I	H	L	R	F	D	I	R	A	S	S	L	P	E	Y	Y	K	E	R	L	L	A	A	S	H	H	L	I	S	S	D	G	V	I	V	I	K	A	Q	E	Y	R	S	Q	E	L	N	R	E	A	A	L	A	R	L	V	A	M	I	K	E
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.
Template Sequence		G	K	K	G	E	S	V	K	R	I	R	E	E	S	G	A	R	I	N	I	S	E	G	N	C	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	I	T	L	T	G	P	.	.	.	.	T	N	A	I	F	K	A	F	A	M	I	I	D	K	L	E	E
Template Known Secondary structure			T	T	T																			S	S		S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.																	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.																			.	.	.	60	.	.	.	.					.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions