Job Description P33349 Confidence 71.44% Date Thu Jan 5 11:51:51 GMT 2012 Rank 3 Aligned Residues 184 % Identity 17% Template c2qgmA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:succinoglycan biosynthesis protein; PDBTitle: crystal structure of succinoglycan biosynthesis protein at2 the resolution 1.7 a. northeast structural genomics3 consortium target bcr136. Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	R	H	H	S	P	A	C	A	R	L	V	K	S	L	I	E	S	Q	R	P	R	Y	V	L	I	E	G	P	A	D	F	N	D	R	V	D	E	L	F	L	A	H	Q	L	P	V	A	I	Y	S	Y	C	Q	Y	Q	D	G	A	A	P	G	R	G	A	W	T	P	F	A	E	F	S	P	E	W	Q	A	L
Query Conservation
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	S	S	E	I	F	T	X	K	F	R	L	V	K	Y	L	V	T	E	X	G	F	T	N	F	A	X	E	E	D	W	G	N	G	L	K	L	N	E	Y	I	Q	T	G	K	G	N	P	.	.	.	.	.	.	.	.	.	.	.	.	R	E	F	L	K	L	L	Y	P	T	D	E	I	I	A	X	I	E	W	X
Template Known Secondary structure			B																																												S		G	.	.	.	.	.	.	.	.	.	.	.	.	G	G	T	S		T	T	S		B
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.													.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		88	.				90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.										.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure				.	.	.																										.	.	.	.	.	.	.	.	.																																									.
Query SS confidence				.	.	.																										.	.	.	.	.	.	.	.	.																																									.
Query Sequence		Q	A	.	.	.	A	R	R	I	Q	A	Q	T	Y	F	I	D	L	P	C	W	A	Q	S	E	E	E	D	D	S	.	.	.	.	.	.	.	.	.	P	D	T	Q	D	E	S	Q	A	L	L	L	R	A	T	R	M	D	N	S	D	T	L	W	D	H	L	F	E	D	E	S	Q	Q	T	A	L	P	S	A	.
Query Conservation				.	.	.																										.	.	.	.	.	.	.	.	.																																									.
Alig confidence				.	.	.																										.	.	.	.	.	.	.	.	.																																									.
Template Conservation
Template Sequence		K	D	Y	N	A	D	P	S	N	K	K	K	I	Q	F	I	G	L	D	L	K	A	L	D	Q	G	S	F	N	K	V	I	D	Y	V	R	L	H	R	P	D	L	L	A	E	V	E	E	N	Y	K	E	L	S	S	F	T	G	S	I	Q	E	Y	X	K	L	T	P	K	L	K	E	K	F	K	A	N	A	E	R
Template Known Secondary structure								T	T			S										S																			T	T	S										T	G	G	G	S		S						T	T	S
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
																				155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	H	Y	F	A	Q	L	R	G	D	A	S	G	D	A	L	N	R	Q	R	E	A	F	M	A	R	W	I	G	W	A	M	Q	Q	N	N	G	D	V	L	V	V	C	G	G	W	H	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	R	L	L	K	D	E	E	Y	I	W	A	K	A	T	A	S	A	I	E	K	F	T	T	X	L	L	P	N	D	Y	P	S	I	I	K	L	H	E	Q	Y	L	A	D	H	A	X	W	A	Q	E	T	F	G	G	K	T	X	V	W	A	H	N	I	H	I
Template Known Secondary structure						T	S																					T	S	S	S	S	S																								S
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions