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Job DescriptionP27298
Confidence100.00%DateWed Jan 25 15:20:46 GMT 2012
Rank8Aligned Residues534
% Identity13%Templated1uzea_
SCOP infoZincin-like Metalloproteases ("zincins"), catalytic domain Neurolysin-like
Resolution1.82

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   45....50.........60.........70.........80.........90.........100.........110.........120....
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Query Sequence  APYTWENLCQPLAEVDDVLGRIFSPVSHLNSVKNSPELREAYEQTLPLLSEYSTWVGQHEGLYKAYRDLRDGDHYATLNT
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Template Conservation 
   
   
         
      
     
           
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Template Sequence  DEAEASKFVEEYDRTSQVVWNEYAEANWNYNTNITTETSKILLQKNMQIANHTLKYGTQAR. . . . . . . . . . KFDVNQLQN
Template Known Secondary structure 
TS

T..........TS
GGG


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   40.........50.........60.........70.........80.........90.........100 .........
 
   125....130.........140... ......150.........160.........170.........180.........190.........200...
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Query Sequence  AQKKAVDNALRDFELSGIG. LPKEKQQRYGEIATRLSELGNQYSNNVLDATMGWTKLVTDEAELAGMPESALAAAKAQAE
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Template Sequence  TT. . . IKRIIKKVQDLERAALPAQELEEYNKILLDMETTYSV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . A
Template Known Secondary structure  ...T

GGGGS
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   110. ........120.........130.........140........ .
 
   204.....210.........220.........230.........240.........250.........260.........270.........280...
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Query Sequence  AKELEGYLLTLDIPSYLPVMTYCDNQALREEMYRAYSTRASDQGPNAGKWDNSKVMEEILALRHELAQLLGFENYAFKSL
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Template Sequence  TVCHPNGSCLQLEPDLTNVMATSRKYEDLLWAWEGWRDKAGRA. . . . . . . . ILQFYPKYVELINQAARLNGYVDAGDSWR
Template Known Secondary structure 
SSS
TTT


T........TTTTT
SS
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   150.........160.........170.........180.........190.. .......200.........210.........220.
 
   284.....290.........300.........310.........320.........330.... .....340.........350.........360.
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Query Sequence  ATKMAENPQQVLDFLTDLAKRARPQGEKELAQLRAFAKAEFGVDELQPWDI. . AYYSEKQKQHLYSISDEQLRPYFPENK
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Template Sequence  SMYE. . . TPSLEQDLERLFQELQPLYLNLHAYVRRALHRHYGAQHINLEGPIPAHLLGNMWAQTWSNIYDLVVPFPSAPS
Template Known Secondary structure  GGG
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TTT
TTT

TTS
TTSSSSTTSS

GGG
S
TTS

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   222... ....230.........240.........250.........260.........270.........280.........290........
 
   362.......370.........380.........390.........400.........410.........420.........430.........440.
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Query Sequence  AVNGLFEVVKRIYGITAKERKDVDVWHPDVRFFELYDENNELRGSFYLDLYARENKRGGAWMDDCVGQMRKADGSLQKPV
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Template Sequence  MDTTEAMLKQGW. . . . . . . . TPRRMFKEADDFFTSLGLLPVPPEFWNKSMLEKPTDGREVVCHASAWDFY. . . . . . NGKD
Template Known Secondary structure 

TT
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TT





B
S


SS




S

S......SSS
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   299300.........310 .........320.........330.........340.........350.........360 ....
 
   442.......450.........460.........470.........480.........490.........500.........510.........520.
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Query Sequence  AYLTCNFNRPVNGKPALFTHDEVITLFHEFGHGLHHMLTRIETAGVSGISGVPWDAVELPSQFMENWCWEPEALAFISGH
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Template Sequence  FRIKQCTTV. . . . . . . . . NLEDLVVAHHEMGHIQYFMQYKDLPVALRE. . GANPGFHEAIGDVLALSVSTPKHLHSLNL.
Template Known Secondary structure 



S.........STTTS
GGG
S..
SSTSTTS.
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   365....370... ......380.........390.........400... ......410.........420.........430..
 
   522.......530.........540.........550.........560.........570.........580.........590.... ...
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Query Sequence  YETGEPLPKELLDKMLAAKNYQAALFILRQLEFGLFDFRLHAEFRPDQGAKILETLAEIKKLVAVVPSPSWGR. . . . FPH
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Template Sequence  LSSDEHDINFLMKMALDKIAF. . . . . IPFSYLVDQWRWRVF. . DGSITKENYNQEWWSLRLKYQGLCPPVPRTQGDFDPG
Template Known Secondary structure 


.......TTSS
TTT

SS


TT

GGG
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   433......440.........450... ......460........ .470.........480.........490.........500.....
 
   598.600.........610.........620.........630.... .....640.........650.........660.... .
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Query Sequence  AFSHIFAGGYAAGYYSYLWADVLAADAFSRFEEEGIF. . . . . . . . . . . NRETGQSFLDNILSRGGSEEPMDLFKRFRG. R
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Template Sequence  AKFHI. . . PSSVPYIRYFVSFIIQFQFHEALCQAAGHTGPLHKCDIYQSKEAGQRLAT. AMKLGFSRPWPEAMQLITGQP
Template Known Secondary structure  GSTTT...TTT


TT

S
GGG


TT
.TTTTSS
SS
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   510.... .....520.........530.........540.........550.........560.... .....570.........580.....
 
   666...670......
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Query Sequence  EPQLDAMLEHY
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Template Conservation    
   

 

Template Sequence  NMSASAMLSYF
Template Known Secondary structure  S

S
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   586...590......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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