Return to main results Retrieve Phyre Job Id

Job DescriptionP27298
Confidence96.04%DateWed Jan 25 15:20:46 GMT 2012
Rank16Aligned Residues95
% Identity23%Templated1g9ka2
SCOP infoZincin-like Metalloproteases ("zincins"), catalytic domain Serralysin-like metalloprotease, catalytic (N-terminal) domain
Resolution1.96

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   347..350.........360.........370.........380.........390.........400.........410.........420......
Predicted Secondary structure 










































Query SS confidence 















































































Query Sequence  SISDEQLRPYFPENKAVNGLFEVVKRIYGITAKERKDVDVWHPDVRFFELYDENNELRGSFYLDLYARENKRGGAWMDDC
Query Conservation    
      

    
      
   


         
 
   
    
 
      
  


   
 

  

     
Alig confidence 





.......





























...................

















Template Conservation    
  
.......   

 

  

 



 
 

        ...................
 
            
  
Template Sequence  QFSALQ. . . . . . . KEQAKLSLESWADVAKVTFTEGPAARDDGH. . . . . . . . . . . . . . . . . . . MTFANFSASNGGAAFAYL
Template Known Secondary structure 


.......TTSSS





...................

GGG
S

Template Predicted Secondary structure 


.......







...................






Template SS confidence 















































































   80..... ....90.........100.........110..... ....120.........130...
 
   427..430.........440.........450.........460.........470.....
Predicted Secondary structure 




























Query SS confidence 
















































Query Sequence  VGQMRKADGSLQKPVAYLTCNFNRPVNGKPALFTHDEVITLFHEFGHGL
Query Conservation             
 
   
  

          
   

 

 





 
Alig confidence 





.......





















.












Template Conservation 
     .......
                  
 
.   
 







Template Sequence  PNSSRK. . . . . . . GESWYLINKDYQVNKTPGEGNY. GRQTLTHEIGHTL
Template Known Secondary structure  TTSTTT.......T
BTTB
TTTS

TTS.
Template Predicted Secondary structure 





.......
















.
Template SS confidence 
















































   135....140 .........150.........160.. .......170.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions