Job Description P27298 Confidence 92.77% Date Wed Jan 25 15:20:46 GMT 2012 Rank 42 Aligned Residues 106 % Identity 13% Template d1bqqm_ SCOP info Zincin-like Metalloproteases ("zincins"), catalytic domain Matrix metalloproteases, catalytic domain Resolution 2.75

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		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	K	A	V	N	G	L	F	E	V	V	K	R	I	Y	G	I	T	A	K	E	R	K	D	V	D	V	W	H	P	D	V	R	F	F	E	L	Y	D	E	N	N	E	L	R	G	S	F	Y	L	D	L	Y	A	R	E	N	K	R	G	G	A	W	M	D	D	C	V	G	Q	M	R	K	A	D	G	S	L	Q
Query Conservation
Alig confidence																																																																											.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		T	Y	E	A	I	R	K	A	F	R	V	W	E	S	A	T	P	L	R	F	R	E	V	P	Y	A	Y	I	R	E	G	H	E	K	Q	A	D	I	M	I	F	F	A	E	G	F	H	G	D	S	T	P	F	D	G	E	G	G	F	L	A	H	A	Y	F	P	G	P	N	I	G	G	D	.	.	.	.	.	.	.
Template Known Secondary structure																	S	S							S			S	S		T	T	S	S	S			S	S							S		S	S	S	S					S	S	S	S								S		S	T	T	T	T		.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		439	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	V	A	Y	L	T	C	N	F	N	R	P	V	N	G	K	P	A	L	F	T	H	D	E	V	I	T	L	F	H	E	F	G	H	G	L
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	T	H	F	D	S	A	E	P	W	T	V	R	N	E	D	L	N	G	N	D	I	F	L	V	A	V	H	E	L	G	H	A	L
Template Known Secondary structure		.	.	.	.					T	T	S			B	S	T	T	S			S	S		B												T	T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions