Return to main results Retrieve Phyre Job Id

Job DescriptionP27298
Confidence100.00%DateWed Jan 25 15:20:46 GMT 2012
Rank14Aligned Residues449
% Identity15%Templatec3dwcA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:metallocarboxypeptidase; PDBTitle: trypanosoma cruzi metallocarboxypeptidase 1
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   54.....60.........70.........80.. .......90.........100.........110.........120........
Predicted Secondary structure 



.....






Query SS confidence 




























. . . . .













































Query Sequence  QPLAEVDDVLGRIFSPVSHLNSVKNSPEL. . . . . REAYEQTLPLLSEYSTWVGQHEGLYKAYRDLRDGDHYATLNTAQKK
Query Conservation    

     
                   .....  
                    
   
           
  
   
Alig confidence 




























.....






























..












Template Conservation    
  
      
  
      
 

  
  
 
   
      
        
       
   ..      
      
Template Sequence  KPYKELERVFTKLYRYGHMLLLADWDSHTMMPKGSDARGAAMAELQLHMHDTITAPKIRALIEEA. . EKSVGDLEKLQRA
Template Known Secondary structure  T



S..TGGGS
Template Predicted Secondary structure 










..




Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60...... ...70.........
 
   129130.........140.........150.........160.........170.........180.........190.........200........
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  AVDNALRDFELSGIGLPKEKQQRYGEIATRLSELGNQYSNNVLDATMGWTKLVTDEAELAGMPESALAAAKAQAEAKELE
Query Conservation       
      
  
    

    
          
                   

 

                  
Alig confidence 












.














...................................................
Template Conservation   
           . 

  
         ...................................................
Template Sequence  NLREMRRAWELEN. LLPEEFVERKTVLTT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  .SS
...................................................
Template Predicted Secondary structure 
.


...................................................
Template SS confidence 















































































   81........90... ......100........
 
   209210.........220.........230.........240... ......250.........260.........270...... ...280...
Predicted Secondary structure 






..



...
Query SS confidence 


































. .
































. . .






Query Sequence  GYLLTLDIPSYLPVMTYCDNQALREEMYRAYSTRA. . SDQGPNAGKWDNSKVMEEILALRHELAQLLGFE. . . NYAFKSL
Query Conservation 
    
        
    
   

 
  
     ..       
   
   
  
   
   
   

 ...
     
Alig confidence  ......................












..




.........


















...






Template Conservation  ......................     
  

   
   
 
......... 
  

 
 

 
           

 

Template Sequence  . . . . . . . . . . . . . . . . . . . . . . KAHQVWKTCREKNDFAGFLP. . . . . . . . . TLKELIALFREEGKLRAGNSGKHPYEALV
Template Known Secondary structure  ......................T
.........TTS


Template Predicted Secondary structure  ......................


.........






Template SS confidence 















































































   109110.........120........ .130.........140.........150.......
 
   284..... 290.........300.........310.........320.........330.........340.........350.........360..
Predicted Secondary structure 




.


















Query SS confidence 





.








































































Query Sequence  ATKMAE. NPQQVLDFLTDLAKRARPQGEKELAQLRAFAKAEFGVDELQPWDIAYYSEKQKQHLYSISDEQLRPYFPENKA
Query Conservation        .    
   
              
  
   
    
   
  

               
      

    
Alig confidence 





.

























...........................



















Template Conservation 
 

 
     
   
  

  
 

   
   ...........................                   
Template Sequence  DIYEPGMTLQRLDEIFGNVRSWLPELLKEVQEK. . . . . . . . . . . . . . . . . . . . . . . . . . . QKALGETVLEPKGPFPVSKQ
Template Known Secondary structure  STT

...........................T










Template Predicted Secondary structure 



...........................














Template SS confidence 















































































   158.160.........170.........180.........190 .........200.........210
 
   363......370.........380.........390.........400.........410.........420.........430.........440..
Predicted Secondary structure 















































Query SS confidence 















































































Query Sequence  VNGLFEVVKRIYGITAKERKDVDVWHPDVRFFELYDENNELRGSFYLDLYARENKRGGAWMDDCVGQMRKADGSLQKPVA
Query Conservation        
   


         
 
   
    
 
      
  


   
 

  

                
 
  
Alig confidence 










...........................









......














...........
Template Conservation            
...........................
 
   



...... 
 


      


...........
Template Sequence  EALCRFFMDVW. . . . . . . . . . . . . . . . . . . . . . . . . . . KFDFDGGRLD. . . . . . VSAHPFCGNSKEDVR. . . . . . . . . . .
Template Known Secondary structure  T...........................T

TTS......
SS

TT...........
Template Predicted Secondary structure 
...........................







......












...........
Template SS confidence 















































































   211........220. ........230. ........240......
 
   443......450.........460 .........470.........480... ......490.........500.........510. ...
Predicted Secondary structure 














..



.











.....
Query SS confidence 

















. .






















.



























. . . . .


Query Sequence  YLTCNFNRPVNGKPALFT. . HDEVITLFHEFGHGLHHMLTRIE. TAGVSGISGVPWDAVELPSQFMENWCWE. . . . . PEA
Query Conservation   
  

          
 ..  

 

 





 
  

   .     
    
 
 

  
   
     .....   
Alig confidence  .






.........
..






















.



























.....


Template Conservation  .


    .........      
 
  

 




             
    
   




   

 



  
    
Template Sequence  . ITTKYTE. . . . . . . . . TEFVTSLLGVIHETGHAKYEQNCGPKGFETQPVCMARSLGVHEGQSLFAEMQIGRSGAFMEFL
Template Known Secondary structure  .

BT.........TB
T
S
TT
TTSTTSS
S
TTTTTS
Template Predicted Secondary structure  .


.........





















Template SS confidence 















































































   247..250... ......260.........270.........280.........290.........300.........310......
 
   515....520.........530......... 540.........550.........560.........570.........580..
Predicted Secondary structure 







............








Query SS confidence 
























. . . . . . . . . . . .










































Query Sequence  LAFISGHYETGEPLPKELLDKMLAA. . . . . . . . . . . . KNYQAALFILRQLEFGLFDFRLHAEFRPDQGAKILETLAEIKK
Query Conservation 
          
         
   ............           
   
 

   
                    
Alig confidence 
























............

















.......

















Template Conservation                        

    



  


 

  

 

 
 
  
 ....... 
 
   

   
     
Template Sequence  APRLVEYFGDQPAFTSSNMKRVIQRVSPGLIRIDADELCYPLHVMLRYEIERDLM. . . . . . . DGNIEAEEVPRVWNEKMK
Template Known Secondary structure 


TT
ST




S
GGG

TTT.......TSS
GGG
Template Predicted Secondary structure 







.......




Template SS confidence 















































































   317..320.........330.........340.........350.........360.........370. ........380.........
 
   583.... ..590.........600.........610.........620.........630.... .....640.........650
Predicted Secondary structure 


.























...........


Query SS confidence 




.














































. . . . . . . . . . .















Query Sequence  LVAVV. PSPSWGRFPHAFSHIFAGGYAAGYYSYLWADVLAADAFSRFEEEGIF. . . . . . . . . . . NRETGQSFLDNILSRG
Query Conservation       .           
 

    
   

 
      
  
       
  ...........    
       
  
Alig confidence 




.
















.




























...........















Template Conservation   



  
  
  
 


 


 .
  





 

 
 


   
                
       

   
   
Template Sequence  SYLGLETLGNDKEGCLQDVHWSG. GMFGYFPTYSLGAMVAAQLMSCVRRELGEEVVDDCIRKGDLGKILAKQNEKIWQHG
Template Known Secondary structure  S


TT

TTTTTS
STTTT.T

S
T
TT

TGGGT
Template Predicted Secondary structure 

















.















Template SS confidence 















































































   390.........400.........410.. .......420.........430.........440.........450.........460........
 
   651........660.........670......
Predicted Secondary structure 










Query SS confidence 

























Query Sequence  GSEEPMDLFKRFRGREPQLDAMLEHY
Query Conservation 

  
 
 
  



     
     
Alig confidence 

























Template Conservation   
    


   


       
 

Template Sequence  SSLTTDELLRQATGETLNPEHYRRHL
Template Known Secondary structure  TSS
SSS

T
Template Predicted Secondary structure 








Template SS confidence 

























   469470.........480.........490....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions