Return to main results Retrieve Phyre Job Id

Job DescriptionP27298
Confidence93.84%DateWed Jan 25 15:20:46 GMT 2012
Rank31Aligned Residues95
% Identity14%Templatec2cltB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:interstitial collagenase; PDBTitle: crystal structure of the active form (full-length) of human2 fibroblast collagenase.
Resolution2.67 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   359360.........370.........380.........390.........400.........410.........420.........430........
Predicted Secondary structure 













































Query SS confidence 















































































Query Sequence  ENKAVNGLFEVVKRIYGITAKERKDVDVWHPDVRFFELYDENNELRGSFYLDLYARENKRGGAWMDDCVGQMRKADGSLQ
Query Conservation     
      
   


         
 
   
    
 
      
  


   
 

  

                
Alig confidence 


























...












........
























....
Template Conservation 
   
  
   
  
  
 
 

    ...


 
 
      ........
        
  
 
  
     
 ....
Template Sequence  VDHAIEKAFQLWSNVTPLTFTKVSEGQ. . . ADIMISFVRGDHR. . . . . . . . DNSPFDGPGGNLAHAFQPGPGIGGD. . . .
Template Known Secondary structure  TSSS

SSS
...
S
S

S........SS



SSSS



S
STTSS
....
Template Predicted Secondary structure 





...






........















....
Template SS confidence 















































































   111........120.........130....... ..140.........150 .........160.........170.....
 
   439440.........450.........460.........470.....
Predicted Secondary structure 
















Query SS confidence 




































Query Sequence  KPVAYLTCNFNRPVNGKPALFTHDEVITLFHEFGHGL
Query Conservation   
   
  

          
   

 

 





 
Alig confidence  .....


















..










Template Conservation  .....
  
             
 .. 

 






Template Sequence  . . . . . AHFDEDERWTNNFREYNLH. . RVAAHALGHSL
Template Known Secondary structure  .....SSS

BSSSSS
B..T
Template Predicted Secondary structure  .....














..
Template SS confidence 




































   176...180.........190.... .....200.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions