|   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | A | Q | L | G | V | T | F | E | R | I | V | T | G | I | E | E | Q | R | Q | P | Q | E | S | A | Q | Q | Y | V | V | R | L | A | R | E | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | R | A | G | V | A | Q | T | A | K | D | L | P | V | L | G | A | D | T | I | V | I | L | N | G | E | V | L | E | K | P | R | D | A |
Query Conservation |   |
|   |   |   |
|   |   |
|   |
|   |   |   |   |
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |
| . | . | . | . | . | . | . | . | . | . |
|   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|   |   |   |
|   |
|   |   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
| . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|
|   |   |   |
|   | . | . | . |
|   |
|
|
|
|   |   |
|
|   |
|
|
|
|   |
|
|   |   |   |
|
|   |
|
|
|
|   |
|
|
|   |   |   |   |
|   |   |   |   |
|
|   |
|
|
|
|
|
|   |
|   | . |   |
|
| . |
|   |
|
|
|
|
|   |
Template Sequence |   |
A | V | E | Q | G | K | E | I | R | V | I | . |
. |
. |
A | C | E | T | R | P | L | N | Q | G | S | R | L | T | C | W | E | L | M | E | D | G | I | D | V | T | L | I | T | D | S | M | V | G | I | V | M | Q | K | G | M | V | D | K | V | I | V | G | A | D | R | I | V | . |
R | D | A | . |
V | F | N | K | I | G | T | Y |
Template Known Secondary structure |   |
 |  |  | T | T |
|
|
|  |  |  | . | . | . |  |  |
|
| T | T | T | T |  |  |  |  | T |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
| G | G | G |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |
|
| S |  |  |  | . | T | T |  | . |  |  |  |  | T | T |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  | . | . | . |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  | . |
|
|
| . |
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
174 | . | . | . | . | . | 180 | . | . | . | . | |
|
|
. | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | |
. | . | 240 | |
. | . | . | . | . | . | . | . |
  |
  |   |
87 | . | . | 90 |
Predicted Secondary structure |   |
 |  |  |  |
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
E | H | A | A |
Query Conservation |   |
|
|
|   |
Alig confidence |   |
|
|
|
|
Template Conservation |   |
  |
|
|
|
Template Sequence |   |
T | V | S | V |
Template Known Secondary structure |   |
 |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
Template SS confidence |   |
|
|
|
|
  |   |
249 | 250 | . | . |
  |