Return to main results Retrieve Phyre Job Id

Job DescriptionP25536
Confidence31.19%DateThu Jan 5 11:42:03 GMT 2012
Rank16Aligned Residues99
% Identity22%Templatec1x3lA_
PDB info PDB header:transferaseChain: A: PDB Molecule:hypothetical protein ph0495; PDBTitle: crystal structure of the ph0495 protein from pyrococccus horikoshii2 ot3
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10..... ....20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 



...
























Query SS confidence 











. . .
































































Query Sequence  LYLASGSPRRQE. . . LLAQLGVTFERIVTGIEEQRQPQESAQQYVVRLAREKARAGVAQTAKDLPVLGADTIVILNGEVL
Query Conservation 







 
  ...

   
  
 
    


       
   
  

  

  
         

 




   
 
 
Alig confidence 











...



















...








































.
Template Conservation   


 
  

 

   
   

   

 
 
 


... 
 
   
  
        
   
  

 





 
 
  .
Template Sequence  FLIASNSISCEAIAREAQRLGFKAYIMTTTLEGEA. . . KDAGLFIGSIVQEIAERGRPFEPPVVLVFGGETTVTIEGKG.
Template Known Secondary structure 
TT

SB...

SS
SS

B


SSS
.
Template Predicted Secondary structure 













...















.
Template SS confidence 















































































   263......270.........280.........290....... ..300.........310.........320.........330........
 
   81.. ......90.........100......
Predicted Secondary structure 


.





Query SS confidence 


.






















Query Sequence  EKP. RDAEHAAQMLRKLSGQTHQVMTA
Query Conservation   

.   


   
  


  
 
 
 
Alig confidence 


.






















Template Conservation 
 








  
  
       

 
Template Sequence  GKGGPNQEIALSATRKISDLEALIVAF
Template Known Secondary structure 
S

TTTTTTS
Template Predicted Secondary structure 









Template SS confidence 


























   339340.........350.........360.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions