Job Description P0AEQ1 Confidence 83.95% Date Thu Jan 5 11:23:55 GMT 2012 Rank 6 Aligned Residues 123 % Identity 10% Template d1tf1a_ SCOP info Profilin-like GAF domain-like IclR ligand-binding domain-like Resolution 1.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.												.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	Q	Q	M	A	S	A	I	I	A	A	G	Q	E	E	A	Q	K	N	N	W	S	V	S	I	A	V	A	D	D	G	G	H	L	L	A	L	S	R	M	D	D	C	A	P	I	A	A	Y	I	.	.	.	.	.	.	.	.	.	.	.	S	Q	E	K	A	R	T	A	A	L	G	R	R	E	T	K	G	Y	E
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.																					.	.	.	.	.	.	.	.	.	.	.									.	.	.
Template Conservation																															.																																								.	.	.
Template Sequence		H	M	D	V	L	S	V	A	G	P	F	M	R	R	L	M	L	L	S	G	E	T	V	N	V	A	I	R	N	.	G	N	E	A	V	L	I	G	Q	L	E	C	K	S	M	V	R	M	C	A	P	L	G	S	R	L	P	L	H	A	S	G	A	G	K	A	L	L	Y	.	.	.	P	L	A	E	E	E	L	M
Template Known Secondary structure																						S									.	T	T											S		S	S	S					T	T					T	T	T	S								T	.	.	.	T	S
Template Predicted Secondary structure																															.																																								.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.				.	.	80	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90																												.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query Sequence		E	M	V	N	N	G	R	T	A	F	V	T	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	T	S	L	E	G	G	V	P	V	V	.	V	D	G	Q	I	I	G	A	V	G	V	S	G	L	T	G	A	Q	D	A	Q	V	A	K	A	A
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation
Template Sequence		S	I	I	L	Q	T	G	L	Q	Q	F	T	P	T	T	L	V	D	M	P	T	L	L	K	D	L	E	Q	A	R	E	L	G	Y	T	V	D	K	E	E	H	V	V	G	L	N	C	I	A	S	A	I	Y	D	D	V	G	S	V	V	A	A	I	S	I	S	G	P	S	S	R	L	T	E	D	R	F	V	S	Q
Template Known Secondary structure													S	T	T				S															T						S	S	S	S	T	T											T	T	S												T	T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		129	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	V	L	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	E	L	V	R	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions