 |
Job Description | P0AEQ1 | Confidence | 13.00% | Date | Thu Jan 5 11:23:55 GMT 2012 |
Rank | 86 | Aligned Residues | 60 |
% Identity | 13% | Template | c3r2nC_ |
PDB info |
PDB header:hydrolase | Chain: C: PDB Molecule:cytidine deaminase; |
PDBTitle: crystal structure of cytidine deaminase from mycobacterium leprae
|
Resolution | 2.30 Å |
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | |
|
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | S | Q | Q | M | A | S | A | I | I | A | A | G | Q | E | E | A | Q | K | . |
. |
N | N | W | S | V | S | I | A | V | A | D | D | G | G | H | L | L | A | L | S | R | M | D | D | C | A | P | I | A | A | Y | I | S | Q | E | K | A | R | T | A | A |
Query Conservation |   |
|
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   | . | . |   |
|   |   |
|   |
|
|
|
|
|   |   |
|   |   |   |   |   |   |
|
|
|
|
|   |   |   |
|   |   |   |
|   |   |
|
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|   |
|
|
|   |
|   |
|
|
|
|
|   |   |   |   |
|   |
|   |   |
|   |
|
|
|
|   |
|   |   |   |   |   |
|
|
|
|   |
|
|   |   |
|
Template Sequence |   |
V | N | W | D | T | L | Q | K | A | A | V | A | A | R | A | N | S | Y | A | P | Y | S | N | F | P | V | G | V | A | G | F | V | N | D | G | R | L | I | T | G | V | N | V | E | N | A | S | Y | G | L | A | L | C | A | E | C | S | M | I | S | A | L |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| B |
| T | T | T |
|
|
|
|  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |
| B |
|
| S | S | G | G | G |
| B |
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|