Job Description P0AEQ1 Confidence 68.31% Date Thu Jan 5 11:23:55 GMT 2012 Rank 11 Aligned Residues 128 % Identity 17% Template c3bjnA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, putative; PDBTitle: crystal structure of c-terminal domain of putative transcriptional2 regulator from vibrio cholerae, targeted domain 79-240 Resolution 1.65 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.												.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.															.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.															.	.
Query Sequence		V	I	L	S	Q	Q	M	A	S	A	I	I	A	A	G	Q	E	E	A	Q	K	N	N	W	S	V	S	I	A	V	A	D	D	G	G	H	L	L	A	L	S	R	M	D	D	C	A	P	I	A	A	Y	I	.	.	.	.	.	.	.	.	.	.	.	S	Q	E	K	A	R	T	A	A	L	G	R	R	E	.	.
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.															.	.
Alig confidence																																		.																					.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation																																		.
Template Sequence		Y	E	T	S	Q	H	N	L	D	A	V	E	A	V	L	S	R	L	Q	K	Q	T	G	E	X	A	A	Y	X	V	P	V	.	G	Y	R	A	L	C	V	S	Q	R	E	S	X	Q	A	L	R	C	S	F	V	Q	G	Q	S	Q	P	L	L	R	G	A	S	S	K	V	X	L	A	Y	X	P	A	A	R	C	E
Template Known Secondary structure			T	T	T	S	T	T																S	S									.	T	T											S	S					S			T	T					T	T	S											S
Template Predicted Secondary structure																																		.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
																	72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	K	G	Y	E	E	M	V	N	N	G	R	T	A	F	V	T	A	P	L	L	T	S	L	E	G	G	V	P	V	V	V	D	G	Q	I	I	G	A	V	G	V	S	G	L	T	G	A	Q	D	A	Q	V	A	K	A	A	A	A	V	L	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	I	L	R	Y	F	G	E	D	P	T	L	D	K	W	Q	S	E	F	E	K	I	R	R	H	G	Y	A	V	S	T	S	E	I	D	P	G	V	S	G	I	S	A	P	V	X	K	G	S	K	L	I	G	A	I	S	V	X	A	P	A	H	R	V	E	S	N	K	Q	R	I	I	L	H	V	L	Q
Template Known Secondary structure							T	T			T	T	S														T	S					S	S	S	S	T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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