Job Description P0AEQ1 Confidence 49.94% Date Thu Jan 5 11:23:55 GMT 2012 Rank 18 Aligned Residues 123 % Identity 19% Template c2ia2D_ PDB info PDB header:transcription Chain: D: PDB Molecule:putative transcriptional regulator; PDBTitle: the crystal structure of a putative transcriptional regulator rha061952 from rhodococcus sp. rha1 Resolution 2.10 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.												.	.	60	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	A	S	A	I	I	A	A	G	Q	E	E	A	Q	K	N	N	W	S	V	S	I	A	V	A	D	D	G	G	H	L	L	A	L	S	R	M	D	D	C	A	P	I	A	A	Y	I	.	.	.	.	.	.	.	.	.	.	.	S	Q	E	K	A	R	T	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.																					.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.
Template Sequence		L	P	E	V	A	Q	P	H	L	E	K	L	S	H	K	V	H	E	S	S	S	V	S	I	L	D	.	G	A	D	I	V	Y	V	A	R	V	P	V	S	R	I	X	T	V	G	I	T	I	G	T	R	L	P	A	Y	A	T	S	X	G	R	V	L	L	A	G	L	P	D	D	E	L	D	A	Y	L	E	K	L
Template Known Secondary structure																			S									.	T	T										B		S	S	S		B				T	T					G	G	G	S									T	S											T
Template Predicted Secondary structure																												.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		67	.	.	70	.	.												.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.																															.																		.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.																															.																		.
Query Sequence		L	G	R	R	E	T	.	.	.	.	.	.	.	.	.	.	.	K	G	Y	E	E	M	V	N	N	G	R	T	A	F	V	T	A	P	L	L	T	S	L	E	G	G	V	P	V	V	.	V	D	G	Q	I	I	G	A	V	G	V	S	G	L	T	G	A	.	Q	D	A	Q	V	A	K	A	A	A	A	V	L	A
Query Conservation								.	.	.	.	.	.	.	.	.	.	.																															.																		.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.																															.																		.
Template Conservation
Template Sequence		D	I	Q	R	L	T	E	R	T	I	T	A	R	D	E	L	K	A	A	I	L	A	V	R	A	D	G	I	C	V	L	D	Q	E	L	E	A	G	L	R	S	X	A	A	P	I	R	G	A	S	G	L	T	V	A	A	V	N	I	S	T	P	A	A	R	Y	S	L	E	D	L	H	S	D	L	I	P	S	L	R
Template Known Secondary structure							S	T	T	S																		S						S	S	S	S	T	T											T	T	S	S											G	G	G	S								T
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		134
Predicted Secondary structure
Query SS confidence
Query Sequence		K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		251

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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