Job Description P75916 Confidence 1.15% Date Wed Jan 25 15:21:04 GMT 2012 Rank 100 Aligned Residues 90 % Identity 8% Template c3eamB_ PDB info PDB header:membrane protein, transport protein Chain: B: PDB Molecule:glr4197 protein; PDBTitle: an open-pore structure of a bacterial pentameric ligand-2 gated ion channel Resolution 2.90 Å

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	W	A	M	V	I	I	Y	G	S	A	L	A	P	H	L	E	I	L	G	Y	V	I	T	G	I	V	A	F	L	M	C	I	Q	A	K	Q	L	L	L	S	F	V	P	G	T	F	I	G	A	C	A	T	F	A	G	Q	G	D	W	K	L	V	L	P	S	L	A	L	G	L	I	F	G	Y	A	M	K	N
Query Conservation
Alig confidence																																																										.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.
Template Sequence		L	F	I	S	W	T	A	F	W	S	T	S	Y	E	A	N	V	T	L	V	V	S	T	L	I	A	H	I	A	F	N	I	L	V	E	T	N	L	P	K	T	P	Y	M	T	Y	T	G	A	I	I	F	M	I	Y	L	.	.	.	.	.	.	F	Y	F	V	A	V	I	E	V	T	V	Q	H	Y	L	K	V	E
Template Known Secondary structure							G	G	G	G																												T	S				S	S														.	.	.	.	.	.																		T
Template Predicted Secondary structure																																																										.	.	.	.	.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.							.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	L	W	L	A	A	R	S	A	K	T	A	H	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Q	P	A	R	A	A	S	I	T	R	A	S	R	I	A
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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