Job Description P16918 Confidence 12.80% Date Wed Jan 25 15:20:40 GMT 2012 Rank 50 Aligned Residues 53 % Identity 13% Template c3swnC_ PDB info PDB header:rna binding protein Chain: C: PDB Molecule:u6 snrna-associated sm-like protein lsm7; PDBTitle: structure of the lsm657 complex: an assembly intermediate of the lsm12 7 and lsm2 8 rings Resolution 2.50 Å

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		1329	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	C	V	E	N	C	L	K	G	K	F	K	E	V	R	P	R	Y	S	V	L	P	D	I	F	T	P	I	N	L	G	L	F	K	N	C	Q	D	W	S	N	D	S	L	E	T	C	K	M	K	C	S	G	N	N	I	G	R	F	I	R	F	V	F
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.							.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.							.	.	.
Template Sequence		S	R	Y	Q	D	Q	R	I	Q	A	T	F	T	.	.	.	.	.	.	.	.	.	G	G	R	Q	I	T	.	.	.	G	I	L	K	G	F	D	Q	L	M	N	L	V	L	D	D	V	E	E	Q	L	R	L	T	G	A	I	R	K	L	G	L	V	V
Template Known Secondary structure		T	T	S	T	T	S							T	.	.	.	.	.	.	.	.	.	T	S					.	.	.								T	T																S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.							.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.										.	.	.	.	.	.				.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions