Job Description P16918 Confidence 13.04% Date Wed Jan 25 15:20:40 GMT 2012 Rank 43 Aligned Residues 53 % Identity 13% Template c3swnA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:u6 snrna-associated sm-like protein lsm5; PDBTitle: structure of the lsm657 complex: an assembly intermediate of the lsm12 7 and lsm2 8 rings Resolution 2.50 Å

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		1329	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	C	V	E	N	C	L	K	G	K	F	K	E	V	R	P	R	Y	S	V	L	P	D	I	F	T	P	I	N	L	G	L	F	K	N	C	Q	D	W	S	N	D	S	L	E	T	C	K	M	K	C	S	G	N	N	I	G	R	F	I	R	F	V	F
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.							.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.							.	.	.
Template Sequence		D	K	C	I	G	S	N	L	W	V	I	M	K	.	.	.	.	.	.	.	.	.	S	E	R	E	F	A	.	.	.	G	T	L	V	G	F	D	D	Y	V	N	I	V	L	K	D	V	T	E	Y	D	T	V	T	G	V	T	E	K	H	S	E	M	L
Template Known Secondary structure				T	T	T	S							S	.	.	.	.	.	.	.	.	.	S	S					.	.	.								T	T													S	S	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.							.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.										.	.	.	.	.	30				.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions