Job Description P16918 Confidence 9.92% Date Wed Jan 25 15:20:40 GMT 2012 Rank 93 Aligned Residues 55 % Identity 15% Template c3cw1Z_ PDB info PDB header:splicing Chain: Z: PDB Molecule:small nuclear ribonucleoprotein f; PDBTitle: crystal structure of human spliceosomal u1 snrnp Resolution 5.49 Å

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		1329	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	C	V	E	N	C	L	K	G	K	F	K	E	V	R	P	R	Y	S	V	L	P	D	I	F	T	P	I	N	L	G	L	F	K	N	C	Q	D	W	S	N	D	S	L	E	T	C	K	M	K	C	S	G	N	N	I	G	R	F	I	R	F	V	F	T	G
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.							.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.							.	.	.
Template Sequence		N	G	L	T	G	K	P	V	M	V	K	L	K	.	.	.	.	.	.	.	.	.	W	G	M	E	Y	K	.	.	.	G	Y	L	V	S	V	D	G	Y	M	N	M	Q	L	A	N	T	E	E	Y	I	D	G	A	L	S	G	H	L	G	E	V	L	I	R	C
Template Known Secondary structure					S	S								T	.	.	.	.	.	.	.	.	.	T	S					.	.	.								T	T													T	T													T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.							.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.										.	.	.	.	.	230				.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions