Job Description P16918 Confidence 25.04% Date Wed Jan 25 15:20:40 GMT 2012 Rank 9 Aligned Residues 231 % Identity 13% Template c2w8bB_ PDB info PDB header:protein transport/membrane protein Chain: B: PDB Molecule:protein tolb; PDBTitle: crystal structure of processed tolb in complex with pal Resolution 1.86 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		N	R	R	E	V	L	H	T	Q	G	E	G	G	L	K	R	V	V	K	K	E	H	A	D	G	S	V	T	Q	S	Q	F	D	A	V	G	.	R	L	R	A	Q	T	D	A	A	G	R	T	T	E	Y	S	P	D	V	V	T	G	L	I	T	R	I	T	T	P	D	G	R	A	S	A	F	Y	Y	N	H	H	S
Query Conservation																																						.
Alig confidence																				.	.																	.
Template Conservation																				.	.
Template Sequence		F	P	Y	E	L	R	V	S	D	Y	D	G	Y	N	Q	F	V	V	.	.	H	R	S	P	Q	P	L	M	S	P	A	W	S	P	D	G	S	K	L	A	Y	V	T	F	E	S	G	R	S	A	L	V	I	Q	T	L	A	N	G	A	V	R	Q	V	A	S	F	P	R	H	N	G	A	P	A	F	S	P	D	G
Template Known Secondary structure											T	T	S		S					.	.				S	S									T	T	S	S								T	T	S	S								T	T	T										S	S									T	T	S
Template Predicted Secondary structure																				.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		473	.	.	.		.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		Q	L	T	S	.	A	T	G	P	D	G	L	E	I	R	R	E	Y	D	E	W	G	R	L	I	Q	E	T	A	P	D	G	D	I	T	R	Y	R	Y	D	N	P	H	S	D	L	P	C	A	T	E	D	A	T	G	S	R	K	T	M	T	W	S	R	Y	G	Q	L	L	S	F	T	D	C	S	G	Y	V	T	R
Query Conservation						.
Alig confidence						.
Template Conservation
Template Sequence		S	K	L	A	F	A	L	S	K	T	G	S	L	N	L	Y	V	M	D	L	A	S	G	Q	I	R	Q	V	T	D	G	R	S	N	N	T	E	P	T	W	F	P	D	S	Q	N	L	A	F	T	S	D	Q	A	G	R	P	Q	V	Y	K	V	N	I	N	G	G	A	P	Q	R	I	T	W	E	G	S	Q	N	Q
Template Known Secondary structure		S								T	T	S	S								T	T	T										S	S									T	T	S	S								T	T	S	S								T	T	S									S	S	S
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		552	.			.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.		.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.
Predicted Secondary structure				.	.																																																				.
Query SS confidence				.	.																																																				.
Query Sequence		Y	D	.	.	H	D	R	F	G	Q	V	T	A	V	H	R	E	E	G	L	S	Q	Y	R	A	Y	D	S	R	G	Q	L	I	A	V	K	D	T	Q	G	H	E	T	R	Y	E	Y	N	A	A	G	D	L	T	T	.	V	I	A	P	D	G	S	R	N	G	T	Q	Y	D	A	W	G	K	A	I	C	T
Query Conservation				.	.																																																				.
Alig confidence				.	.																																																				.
Template Conservation
Template Sequence		D	A	D	V	S	S	D	G	K	F	M	V	M	V	S	S	N	G	G	Q	Q	H	I	A	K	Q	D	L	A	T	G	G	V	Q	V	L	S	S	T	F	L	D	E	T	P	S	L	A	P	N	G	T	M	V	I	Y	S	S	S	Q	G	M	G	S	V	L	N	L	V	S	T	D	G	R	F	K	A	R
Template Known Secondary structure							T	T	S	S									T	T									T	T	T									S	S	S								T	T	S	S									T	T									T	T	S
Template Predicted Secondary structure
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions