Return to main results Retrieve Phyre Job Id

Job DescriptionP77174
Confidence21.17%DateThu Jan 5 12:25:59 GMT 2012
Rank469Aligned Residues53
% Identity9%Templated2hr3a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   137..140.........150.........160....... ..170.........180.........
Predicted Secondary structure 






.




Query SS confidence 






























.





















Query Sequence  RIAATIRHNRARGRHQITAMSEIVRELSQLG. WDDNKIGKELGMDSDEVLRLKQ
Query Conservation      

 

  
  
   
 
  
  
   
. 
 
 

  

 
   
 

  
Alig confidence 






























.





















Template Conservation   
 
 
       


  
  

  
    
  
  


  
 
   


  
 
Template Sequence  TLTRRLRREAQADPVQFSQLVVLGAIDRLGGDVTPSELAAAERXRSSNLAALLR
Template Known Secondary structure  TT


TTS
B
TT

Template Predicted Secondary structure 












Template SS confidence 





















































   1920.........30.........40.........50.........60.........70..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions