Job Description P77174 Confidence 82.87% Date Thu Jan 5 12:25:59 GMT 2012 Rank 104 Aligned Residues 45 % Identity 36% Template d1rp3a1 SCOP info DNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 domain Resolution 2.30

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		155	.	.	.	.	160	.	.	.		.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.							190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.					.	.																							.	.	.	.	.	.
Query SS confidence											.					.	.																							.	.	.	.	.	.
Query Sequence		A	M	S	E	I	V	R	E	L	.	S	Q	L	G	.	.	W	D	D	N	K	I	G	K	E	L	G	M	D	S	D	E	V	L	R	L	K	Q	.	.	.	.	.	.	I	N	G	L	Q	E	L	F	A	D
Query Conservation											.					.	.																							.	.	.	.	.	.
Alig confidence											.					.	.																							.	.	.	.	.	.
Template Conservation
Template Sequence		R	I	K	E	V	V	E	K	L	K	E	K	L	G	R	E	P	T	D	E	E	V	A	K	E	L	G	I	S	T	E	E	L	F	K	T	L	D	K	I	N	F	S	Y	I	L	S	L	E	E	V	F	R	D
Template Known Secondary structure															S	S												T	S
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions