Return to main results Retrieve Phyre Job Id

Job DescriptionP06616
Confidence99.90%DateThu Jan 5 10:59:16 GMT 2012
Rank26Aligned Residues155
% Identity19%Templated2dy1a2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30..... ....40.........50.........60.........70...
Predicted Secondary structure 









.................


















Query SS confidence 
























. . . . . . . . . . . . . . . . .





































Query Sequence  IAIVGRPNVGKSTLLNKLLGQKISI. . . . . . . . . . . . . . . . . TSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEEKRA
Query Conservation 




 









 
 
 


 .................

    


            

   



        
Alig confidence 
























.................





























........
Template Conservation 




  






 
 
                             
 
              
   
  
........
Template Sequence  VALVGHAGSGKTTLTEALLYKTGAKERRGRVEEGTTTTDYTPEAKLHRTTVRTGVAPLLFRGHRVFLLDAPG. . . . . . . .
Template Known Secondary structure  STTSSTTSSSS


GGGT

SS

STTS

S
TT


........
Template Predicted Secondary structure 

































........
Template SS confidence 















































































   12.......20.........30.........40.........50.........60.........70.........80...
 
   74.....80.........90.........100 .........110.........120.........130.........140......
Predicted Secondary structure 










.














......
Query SS confidence 


























.













































. . . . . .
Query Sequence  INRLMNKAASSSIGDVELVIFVVEGTR. WTPDDEMVLNKLREGKAPVILAVNKVDNVQEKADLLPHLQFLASQM. . . . . .
Query Conservation                             .                 
 








                  ......
Alig confidence  .

























.













































......
Template Conservation  .              

 

 



           
  
     
 
 



 
                       
 
Template Sequence  . YGDFVGEIRGALEAADAALVAVSAEAGVQVGTERAWTVAERLGLPRMVVVTKLDKGGDYYALLEDLRSTLGPILPIDLP
Template Known Secondary structure  .SGGG
STTT
S
TT


GGG



S
Template Predicted Secondary structure  .























Template SS confidence 















































































   84.....90.........100.........110.........120.........130.........140.........150.........160..
 
  
Predicted Secondary structure  ................................................................................
Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ................................................................................
Template Conservation           
 
 
                            
  
                
                 
Template Sequence  LYEGGKWVGLIDVFHGKAYRYENGEEREAEVPPEERERVQRFRQEVLEAIVETDEGLLEKYLEGEEVTGEALEKAFHEAV
Template Known Secondary structure  TTTTTTTT


GGGTT
T



Template Predicted Secondary structure 
































Template SS confidence 















































































   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   147..150.........160.........170....
Predicted Secondary structure  ...











Query SS confidence  . . .



























Query Sequence  . . . NFLDIVPISAETGLNVDTIAAIVRKHLP
Query Conservation  ...    

 


  
 


 
   
   
 
Alig confidence  ...



























Template Conservation        

  


    

  


 
    
Template Sequence  RRGLLYPVALASGEREIGVLPLLELILEALP
Template Known Secondary structure  TTS

BTTTTBSS
Template Predicted Secondary structure 











Template SS confidence 






























   243......250.........260.........270...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions